Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E24
(93 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 33 0.21
BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 33 0.21
BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 33 0.21
AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 33 0.21
AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 32 0.28
AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 32 0.28
>L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10
protein.
Length = 205
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA
2510008H07 gene protein.
Length = 219
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 113 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 142
>BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens
clone TCBAP0781 mRNA sequence. ).
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERAGRHCGALRVLNSYWVGEDSTY 127
>AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15
pseudogene 3 protein.
Length = 204
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSVAEERVGRHCGALRVLNSYWVGEDSTY 127
>AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15
protein.
Length = 204
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 2 LQSIAEEXXXXXXXXXXXXNSYWVAQDSSY 91
LQS+AEE NSYWV +DS+Y
Sbjct: 98 LQSLAEERAGRHCGALRVLNSYWVGEDSTY 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,122,162
Number of Sequences: 237096
Number of extensions: 82709
Number of successful extensions: 296
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 76,859,062
effective HSP length: 12
effective length of database: 74,013,910
effective search space used: 1332250380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -