Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_E23
         (322 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060919-1|AAL28467.1|  177|Drosophila melanogaster GM06264p pro...    26   9.4  
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr...    26   9.4  
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot...    26   9.4  
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB...    26   9.4  
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA...    26   9.4  

>AY060919-1|AAL28467.1|  177|Drosophila melanogaster GM06264p
           protein.
          Length = 177

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 309 HCPHRTLPQRK 277
           HCPH+T P+RK
Sbjct: 109 HCPHQTTPKRK 119


>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
            protein.
          Length = 1711

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 309  HCPHRTLPQRK 277
            HCPH+T P+RK
Sbjct: 1627 HCPHQTTPKRK 1637


>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
          Length = 1695

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 309  HCPHRTLPQRK 277
            HCPH+T P+RK
Sbjct: 1627 HCPHQTTPKRK 1637


>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
            isoform B protein.
          Length = 1695

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 309  HCPHRTLPQRK 277
            HCPH+T P+RK
Sbjct: 1627 HCPHQTTPKRK 1637


>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
            isoform A protein.
          Length = 1711

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 309  HCPHRTLPQRK 277
            HCPH+T P+RK
Sbjct: 1627 HCPHQTTPKRK 1637


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.310    0.123    0.332 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,864,298
Number of Sequences: 53049
Number of extensions: 130932
Number of successful extensions: 303
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)