Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_E22
         (255 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006655-2|AAF39876.1|  208|Caenorhabditis elegans Hypothetical ...    31   0.15 
Z70307-5|CAA94331.1|  209|Caenorhabditis elegans Hypothetical pr...    30   0.26 
U42839-2|AAC69015.1|  425|Caenorhabditis elegans Venom-allergen-...    28   0.80 
U42839-1|AAM54195.1|  424|Caenorhabditis elegans Venom-allergen-...    28   0.80 
AF112356-1|AAD27559.1|  425|Caenorhabditis elegans venom allerge...    28   0.80 
Z77659-1|CAB01164.1|  401|Caenorhabditis elegans Hypothetical pr...    28   1.1  
Z70307-2|CAA94335.1|  208|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z68108-3|CAA92137.1|  221|Caenorhabditis elegans Hypothetical pr...    26   3.2  
U32305-20|AAK18863.1|  796|Caenorhabditis elegans Worm armadillo...    26   3.2  
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    26   3.2  
AF013951-1|AAC47748.1|  796|Caenorhabditis elegans wrm-1 protein.      26   3.2  
U80837-6|AAB37906.1|  172|Caenorhabditis elegans Hypothetical pr...    26   4.3  
AF038615-2|AAB94145.1|  782|Caenorhabditis elegans Hypothetical ...    25   5.6  
AF025453-4|ABC48262.1|  905|Caenorhabditis elegans Hypothetical ...    25   7.4  
AF025453-3|AAM98053.2|  828|Caenorhabditis elegans Hypothetical ...    25   7.4  
AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical...    25   7.4  
Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical pr...    25   9.8  
U28735-8|AAF99957.2|  434|Caenorhabditis elegans Acetylcholine r...    25   9.8  
AY519852-1|AAR89633.1|  434|Caenorhabditis elegans acetylcholine...    25   9.8  

>AC006655-2|AAF39876.1|  208|Caenorhabditis elegans Hypothetical
           protein H10D18.4 protein.
          Length = 208

 Score = 30.7 bits (66), Expect = 0.15
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 54  LAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATGRKYMVW 221
           +   +C+  +   +    S       V+ HN  R  +A+G      +  P+A+  + +VW
Sbjct: 1   MKFALCLLAIFGCATAQFSSTAQGQIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVW 60

Query: 222 DEELAAKAAKW 254
           DE +AA A ++
Sbjct: 61  DETVAAAAQEY 71


>Z70307-5|CAA94331.1|  209|Caenorhabditis elegans Hypothetical
           protein C39E9.5 protein.
          Length = 209

 Score = 29.9 bits (64), Expect = 0.26
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +3

Query: 36  VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATG 203
           ++  L+LA+V C+G  H++   +   KQ    VN HN  R  +AKG+     +   +AT 
Sbjct: 1   MQTALVLALV-CVG-AHAQ--FSEGGKQ--SMVNAHNAVRSSIAKGEYVAKGTKKDSATN 54

Query: 204 RKYMVWDEELAAKAAKW 254
              M WD  LA  A  +
Sbjct: 55  MLKMKWDNSLAQSAQNY 71


>U42839-2|AAC69015.1|  425|Caenorhabditis elegans
           Venom-allergen-like protein protein1, isoform a protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 0.80
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = +3

Query: 30  MAVRALLILAMVV--CIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-QVSGHPAAT 200
           MAV A+++L   +   +      S   ++ +  K F + HN  R+ +AKG + +     +
Sbjct: 1   MAVLAVVLLLACLERAVAQTFGCSNTKINDQARKMFYDAHNDARRSMAKGLEPNKCGLLS 60

Query: 201 GRKYMV---WDEELAAKAAKW 254
           G K +    WD E+ AKA +W
Sbjct: 61  GGKNVYELNWDCEMEAKAQEW 81


>U42839-1|AAM54195.1|  424|Caenorhabditis elegans
           Venom-allergen-like protein protein1, isoform b protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 0.80
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = +3

Query: 30  MAVRALLILAMVV--CIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-QVSGHPAAT 200
           MAV A+++L   +   +      S   ++ +  K F + HN  R+ +AKG + +     +
Sbjct: 1   MAVLAVVLLLACLERAVAQTFGCSNTKINDQARKMFYDAHNDARRSMAKGLEPNKCGLLS 60

Query: 201 GRKYMV---WDEELAAKAAKW 254
           G K +    WD E+ AKA +W
Sbjct: 61  GGKNVYELNWDCEMEAKAQEW 81


>AF112356-1|AAD27559.1|  425|Caenorhabditis elegans venom
           allergen-like protein protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 0.80
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = +3

Query: 30  MAVRALLILAMVV--CIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-QVSGHPAAT 200
           MAV A+++L   +   +      S   ++ +  K F + HN  R+ +AKG + +     +
Sbjct: 1   MAVLAVVLLLACLERAVAQTFGCSNTKINDQARKMFYDAHNDARRSMAKGLEPNKCGLLS 60

Query: 201 GRKYMV---WDEELAAKAAKW 254
           G K +    WD E+ AKA +W
Sbjct: 61  GGKNVYELNWDCEMEAKAQEW 81


>Z77659-1|CAB01164.1|  401|Caenorhabditis elegans Hypothetical
           protein F23B12.1 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 181 DT*PLASNCLL*LCPLTKSLICLHDKFSRDLL 86
           D   LA NC+     ++K +IC+H   S DL+
Sbjct: 217 DAFQLAFNCMPLCAVVSKKIICMHGGISEDLI 248


>Z70307-2|CAA94335.1|  208|Caenorhabditis elegans Hypothetical
           protein C39E9.2 protein.
          Length = 208

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +3

Query: 132 VNGHNYRRQLLAKGQV----SGHPAATGRKYMVWDEELAAKA 245
           +N HN  R  +AKG      +  PAA+    M WD  +AA A
Sbjct: 28  LNVHNTLRSRIAKGTYVAKGTAKPAASDMLKMKWDATVAASA 69


>Z68108-3|CAA92137.1|  221|Caenorhabditis elegans Hypothetical
           protein T05A10.4 protein.
          Length = 221

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +3

Query: 78  HVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-QVSGHPAATGRKYMV---WDEELAAKA 245
           HV +KS +    ++I   +  HN  R+ LA G Q +      G + M    WD ELA+ A
Sbjct: 59  HVCNKSTITQLQQEI--ILTTHNELRRSLAFGKQRNKRGLMNGARNMYKLDWDCELASLA 116

Query: 246 AKW 254
           A W
Sbjct: 117 ANW 119


>U32305-20|AAK18863.1|  796|Caenorhabditis elegans Worm armadillo
           protein 1 protein.
          Length = 796

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 99  LNLSCKQIKDFVNGHNYRRQLLAKGQVSGHPAATGRKYMVWDEEL 233
           +N    +  +FVN   Y+R L    QVS +   T R+Y +   E+
Sbjct: 129 VNTEMGEFNNFVNQAPYQRALTRVSQVSENQDPTNRQYPMTAPEI 173


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 166 ASNCLL*LCPLTKSLIC 116
           +SNC+L L PL  SL+C
Sbjct: 134 SSNCVLLLAPLINSLVC 150


>AF013951-1|AAC47748.1|  796|Caenorhabditis elegans wrm-1 protein.
          Length = 796

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 99  LNLSCKQIKDFVNGHNYRRQLLAKGQVSGHPAATGRKYMVWDEEL 233
           +N    +  +FVN   Y+R L    QVS +   T R+Y +   E+
Sbjct: 129 VNTEMGEFNNFVNQAPYQRALTRVSQVSENQDPTNRQYPMTAPEI 173


>U80837-6|AAB37906.1|  172|Caenorhabditis elegans Hypothetical
           protein F07E5.7 protein.
          Length = 172

 Score = 25.8 bits (54), Expect = 4.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 139 DTIIGDNYWLRVRYQDTLLQLEG 207
           DT  G+ YW   +Y D L+ L G
Sbjct: 123 DTFNGNFYWTMTKYPDGLIDLGG 145


>AF038615-2|AAB94145.1|  782|Caenorhabditis elegans Hypothetical
           protein R02D3.4 protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 175 RYQDTLLQLEGNIWCGMKN*QLKQR 249
           R  D L + E   W G+KN  LK+R
Sbjct: 465 RMDDNLTEKETEKWTGLKNSDLKKR 489


>AF025453-4|ABC48262.1|  905|Caenorhabditis elegans Hypothetical
           protein C08F1.5b protein.
          Length = 905

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 135 NGHNYRRQLLAKGQVSGHPAATGRKYMVWD 224
           NGHNY++  + K + +G    T  +++ WD
Sbjct: 587 NGHNYKQAAMLKFEKAGGQGIT--EFIKWD 614


>AF025453-3|AAM98053.2|  828|Caenorhabditis elegans Hypothetical
           protein C08F1.5a protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 135 NGHNYRRQLLAKGQVSGHPAATGRKYMVWD 224
           NGHNY++  + K + +G    T  +++ WD
Sbjct: 510 NGHNYKQAAMLKFEKAGGQGIT--EFIKWD 537


>AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.5 protein.
          Length = 121

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 112 HDKFSRDLLWTCPIHTTIAKIRSAR 38
           H+   +DLLW  P      ++R  R
Sbjct: 40  HESVKKDLLWAAPYDARFPQVRKQR 64


>Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical
           protein F20D1.7 protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = -3

Query: 124 LICLHDKFSRDLLWTCPIHTTI----AKIRSARTAIVQLYVTTLV 2
           + C +D  +  LLW  P  TTI     K+R +       + TTL+
Sbjct: 418 IYCANDGTNSKLLWISPNKTTIEASHPKLRKSSDKRTDYFTTTLL 462


>U28735-8|AAF99957.2|  434|Caenorhabditis elegans Acetylcholine
           receptor protein 22 protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 52  FWQWSYVLDTSIVNLY*TCHANKSKISSTDTIIGDNYWLRVRYQDTL 192
           F  WSY       N+  T    KSK S  D +  +   +  +Y DTL
Sbjct: 177 FGSWSYQAHAISFNVLDTFVPKKSKNSEWDIVSFNATKMTTKYGDTL 223


>AY519852-1|AAR89633.1|  434|Caenorhabditis elegans acetylcholine
           receptor (51.1 kD)(acr-22) protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 52  FWQWSYVLDTSIVNLY*TCHANKSKISSTDTIIGDNYWLRVRYQDTL 192
           F  WSY       N+  T    KSK S  D +  +   +  +Y DTL
Sbjct: 177 FGSWSYQAHAISFNVLDTFVPKKSKNSEWDIVSFNATKMTTKYGDTL 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,328,279
Number of Sequences: 27780
Number of extensions: 115548
Number of successful extensions: 275
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)