Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E21
(470 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 40 1e-04
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 31 0.12
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.27
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 28 0.62
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 28 0.62
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 28 0.83
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.1
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 27 1.1
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 27 1.4
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.4
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.4
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 1.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 1.9
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 1.9
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 26 2.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.3
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 4.4
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 25 4.4
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 25 5.8
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 5.8
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 25 5.8
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 5.8
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 7.7
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 7.7
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 25 7.7
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 7.7
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 7.7
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 7.7
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.7
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 25 7.7
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 40.3 bits (90), Expect = 1e-04
Identities = 33/102 (32%), Positives = 53/102 (51%)
Frame = +3
Query: 159 KHAQDFQKTISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAR 338
K +DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 339 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNT 464
E Q + Q+L+R + + +K H E Q L +LQT I N+
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNS 548
Score = 30.3 bits (65), Expect = 0.15
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +3
Query: 150 DLEKHAQDFQKTISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 329
DLEK +D SE+ F ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKD-----SEKNFLRKEAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 330 KAREVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQ 458
K + L Q + R ED+ K + E +L E L Q
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQ 1432
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 30.7 bits (66), Expect = 0.12
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Frame = +3
Query: 111 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFFAIVNSKNTESLNKALKEGSDSMV 272
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 273 QQVSELSNSLQGA------------LTDANGKAREVLQQARQNLERTVEDLRKAHPDVEK 416
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 417 QATALHEKLQTAIQN 461
++ + + + + N
Sbjct: 185 ESEVSFQTISSRVDN 199
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.27
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 345 LQQARQNLERTVEDLRKAHPDVEK 416
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.3 bits (60), Expect = 0.62
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 321 ANGKAREV--LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQN 461
A K +E+ LQQ R NLER +D+ +E+ A EK + +QN
Sbjct: 237 ARNKQKEINILQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN 287
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 0.62
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +3
Query: 138 TILQDLEKHAQDFQKTISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 317
TIL L + Q F+K I+ F SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 318 DANGKAREVLQQARQNLERTVEDLRK 395
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.9 bits (59), Expect = 0.83
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Frame = +3
Query: 111 AMVRRDAPNTILQDLEKHAQDFQKTISEQFFA--IVNSKNTESLNKALKEGSDSMVQQVS 284
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 285 E-LSNSLQGALTDANGKAREVLQQARQNLERTVEDLRKAHPDVEKQATALHEK----LQT 449
+ NSL +L+ +R +R NL+ + A D + A L L++
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRS 191
Query: 450 AIQNTLK 470
A++N L+
Sbjct: 192 AMENVLQ 198
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 364 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 245
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.5 bits (58), Expect = 1.1
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 210 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAREVLQQARQNLERTVEDL 389
+N S++ L + D + S + NG A E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 390 RKAHPDVEKQ 419
RKA D+E++
Sbjct: 86 RKARLDLEEE 95
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 27.1 bits (57), Expect = 1.4
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = +3
Query: 153 LEKHAQDFQKTISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGK 332
L KH D + S FF++++S N E L + + E + V L L +
Sbjct: 292 LSKHLDDLLENQSTGFFSMIDSSNFEGL-QLVYESFSRVELGVKSLKKYLAKYVAHHGKL 350
Query: 333 AREVLQQA---RQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL 467
E QA + + R + A V+K AL ++L T I T+
Sbjct: 351 INETTSQALEGKMAVGRLSSNATMATLWVQK-VLALWDRLNTIISTTM 397
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 66 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 173
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 129 APNTILQDLEKHAQDFQKT--ISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 302
A + +++ HA+ + T ISE V +TES N+A+K+ D+ ++ +SE L
Sbjct: 159 ATDICVKETALHARHWYNTYIISEA----VKGSSTESHNQAIKDFRDAKIEVISEKDPIL 214
Query: 303 Q 305
Q
Sbjct: 215 Q 215
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.6 bits (56), Expect = 1.9
Identities = 23/84 (27%), Positives = 32/84 (38%)
Frame = +2
Query: 206 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 385
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 386 SPQGAPRRRETSHRITREAANRHP 457
+ + ET H ++ P
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQP 749
Score = 25.0 bits (52), Expect = 5.8
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +2
Query: 293 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 463
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 464 TK 469
T+
Sbjct: 723 TR 724
Score = 24.6 bits (51), Expect = 7.7
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +2
Query: 218 KEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQG 397
KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 709 KESTPSKQPTEGQ---HTRQESLPSQQTTETKHLRKE----SIPSKQPTEGQHARQESLP 761
Query: 398 APRRRETSHRITREAANRHP 457
+ + ET H ++ P
Sbjct: 762 SQQTTETKHLRKESIPSKQP 781
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 1.9
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 267 MVQQVSELSNSLQGALTDANGKAREVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 446
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
Score = 25.4 bits (53), Expect = 4.4
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 213 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAREVLQQARQNLERTVEDLR 392
+S E++ K + ++++ L+N L +A + E +Q L EDLR
Sbjct: 998 SSLRCENITKDSETRVALLLEENKHLNNELSSH-RNAEKQHLEKENDYKQQLLLVTEDLR 1056
Query: 393 KAHPDVEKQ 419
K D EK+
Sbjct: 1057 KTREDYEKE 1065
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 1.9
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 225 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAREVLQQARQN----LERTVEDLR 392
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 393 KAHPDVEKQATALHEKLQTAIQNTLK 470
A D K L + + + + T K
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTK 960
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 1.9
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 219 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAREVLQQARQNLERT 377
K T++ + +E +S + + E + L A L D+ KA+ L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 26.2 bits (55), Expect = 2.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 180 KTISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 299
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 3.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAREVLQQARQNLERTVEDLRKAHPD 407
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 408 V-EKQATALHEKLQTAIQNTLK 470
V + Q+ K +Q T++
Sbjct: 880 VLQLQSNITELKQDITLQRTVR 901
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 4.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 223 FFELTIAKNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 107
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 4.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 129 APNTILQDLEKHAQDFQKTISEQFFAIVNSKNTESLNKAL 248
APN I DLE++ K E F +V +L++ L
Sbjct: 636 APNAIGNDLERNRTSLVKIELENAFPLVKESYINTLSRVL 675
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 25.0 bits (52), Expect = 5.8
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +3
Query: 348 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL 467
++AR+NL+ V + + P+++ + + +L+ I+++L
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSL 124
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 5.8
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 385 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 236
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.0 bits (52), Expect = 5.8
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFFAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 317
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 318 DANGKAREVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 446
+A K + V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 5.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 367 WSAQSRISARRTPTSRNKPPHYTRSCKPP 453
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 24.6 bits (51), Expect = 7.7
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +3
Query: 210 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAREVLQQARQNLERTVEDL 389
VN + ES + LKE DS+ QV S+ + + RE L + + + +L
Sbjct: 338 VNIEEKESQLQLLKEKRDSLKYQVENQDISI--SEFEKMVSEREQLDRNLNMIGSKISEL 395
Query: 390 RKAHPDVEKQATALHEKLQTAIQ 458
RK D + A + L+ +Q
Sbjct: 396 RKEVFDTDLLIQASIDSLEKKVQ 418
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 7.7
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -2
Query: 457 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSL 335
W+ + S + F T+G R S + FWR + +
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGI 145
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 24.6 bits (51), Expect = 7.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 136 ILYCKIWRSTPRISRRRSVNNFSQSS 213
+ +CK+ STP R V+NF+ SS
Sbjct: 573 VRFCKLLGSTPFSERDLIVHNFNTSS 598
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.6 bits (51), Expect = 7.7
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 228 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAREVLQQARQNLERTVEDLRKAHPD 407
E + A E S++Q++SEL +QG L +++ RQ+ + ++ L++ +
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENP--DLIAALRQDKGQNLQHLQEHYNI 136
Query: 408 VEKQATALHEKLQ 446
++ L++ Q
Sbjct: 137 TPERIAVLYKFAQ 149
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 7.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 23 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 121
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 24.6 bits (51), Expect = 7.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 345 LQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 452
L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 40 LEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 7.7
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +2
Query: 347 PTSSP--ELGAHSRGSPQG 397
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 24.6 bits (51), Expect = 7.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 312 LTDANGKAREVLQQARQN 365
LTD A+E+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,729,050
Number of Sequences: 5004
Number of extensions: 30310
Number of successful extensions: 178
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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