Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E19
(445 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1131 + 27872870-27872958,27873036-27873281,27874058-278741... 36 0.015
02_05_0182 + 26530799-26530852,26531677-26532927,26533250-265333... 36 0.015
06_01_0024 + 233101-233189,233259-233340,233430-233493,233636-23... 32 0.24
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 31 0.31
11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532... 29 1.3
03_02_0549 - 9395978-9396428,9396517-9396863 29 1.3
03_02_0548 - 9392048-9392501,9392596-9392939 29 1.3
02_05_1349 + 35841694-35843738,35844506-35844624,35844932-358450... 28 2.9
07_03_1160 - 24430240-24431268 28 3.9
05_01_0565 - 4926137-4926847,4926928-4927257 28 3.9
03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648 27 5.1
12_01_0740 + 6646471-6649407 27 6.8
12_01_0722 + 6355972-6359031 27 6.8
08_02_0772 + 21035762-21037567 27 6.8
08_01_0961 - 9622444-9622928,9623011-9623102,9623862-9624002,962... 27 6.8
07_03_0438 - 18200329-18200430,18201203-18201335,18201964-182020... 27 6.8
07_01_0677 + 5087584-5087589,5088890-5089172,5093561-5093704,509... 27 6.8
04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584... 27 6.8
01_07_0357 + 43032552-43033034,43034054-43034383,43035210-430353... 27 6.8
11_04_0106 - 13512681-13513198,13513304-13513484 27 9.0
08_01_0351 + 3095639-3095995,3096134-3096187,3096407-3096490,309... 27 9.0
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148... 27 9.0
>06_03_1131 +
27872870-27872958,27873036-27873281,27874058-27874163,
27874665-27875209,27875455-27875914,27876234-27876319,
27877092-27877194
Length = 544
Score = 35.9 bits (79), Expect = 0.015
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 11 YYKAHSTGDIEGMALFKLAKLYEKSNMPNSAAAAYTAACQ--DSANAGSKELPAAQRYLA 184
Y ++ + D EG+AL +LAKL+ AA Y + + + A +LA
Sbjct: 398 YERSANNNDTEGIALHQLAKLHGMLGQSEEAAFYYKKDLERMEVEERQGQNFVEALLFLA 457
Query: 185 QYYLRFSLLDLASHYAYKCLDH-DCTKEVGKSILK 286
++ + A HY + LD+ +E KSIL+
Sbjct: 458 KHCKSIGRFEEAEHYCTRLLDYTGPERETAKSILQ 492
>02_05_0182 +
26530799-26530852,26531677-26532927,26533250-26533335,
26533673-26533733
Length = 483
Score = 35.9 bits (79), Expect = 0.015
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 11 YYKAHSTGDIEGMALFKLAKLYEKSNMPNSAAAAYTAACQ--DSANAGSKELPAAQRYLA 184
Y ++ + D EG+AL +LAKL+ AA Y + + + A +LA
Sbjct: 351 YERSANNNDTEGIALHQLAKLHGMLGQSEEAAFYYKKDLERMEVEERQGQNFVEALLFLA 410
Query: 185 QYYLRFSLLDLASHYAYKCLDH-DCTKEVGKSILK 286
++ + A HY + LD+ +E KSIL+
Sbjct: 411 KHCKSIGRFEEAEHYCTRLLDYTGPERETAKSILQ 445
>06_01_0024 +
233101-233189,233259-233340,233430-233493,233636-233826,
233901-233978,234133-234207,234436-234506,234710-234826,
234915-235016,235196-235316,235451-235537,235708-235794,
236237-236338,236629-236692,237554-237580,237581-237636,
238185-238256,238540-238622,238953-239001,239335-239397,
239633-239722,239823-239909,240072-240146,240222-240280,
240511-240604,240681-240899,240998-241092,241504-241594,
241663-241767,241847-241885,242263-242352,242538-242639,
242837-242918,243075-243160,243264-243362
Length = 1030
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 251 DCTKEVGKSILKIISERRLAPSSSQSGNTPEDLPDAIKNVS 373
+ TK++ KS+++I+ +RRL+ +S TP L ++N++
Sbjct: 355 EATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLN 395
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 290 ISERRLAPSSSQSGNTPEDLPDAIKNVSTVSLIQDTPKTPLPSPDVTPDN 439
++ R+ P SS +G AI V++ + +Q TP T PSP T N
Sbjct: 685 MNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQSTPSTSFPSPVPTTSN 734
>11_01_0657 +
5322295-5323367,5323436-5323555,5323743-5323791,
5323968-5324084,5324200-5324268,5324394-5324488,
5325183-5325521,5327043-5327084,5327814-5327907,
5328121-5328190,5328719-5329677
Length = 1008
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 290 ISERRLAPSSSQSGNTPEDLPDAIKNVSTVSLIQDTPKTPLPSPDVTPDN 439
++ R+ P SS +G AI V++ + +Q P T PSP T N
Sbjct: 773 MNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQSNPSTSFPSPMPTTSN 822
>03_02_0549 - 9395978-9396428,9396517-9396863
Length = 265
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 175 TLSCWQLFASSIGRILTGCSVRSRSTIWHIRLFI 74
T C AS+ +ILT C+ +S S IW+ F+
Sbjct: 89 TSDCQACLASAANQILTSCNYQSDSRIWYDYCFM 122
>03_02_0548 - 9392048-9392501,9392596-9392939
Length = 265
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 175 TLSCWQLFASSIGRILTGCSVRSRSTIWHIRLFI 74
T C AS+ +ILT C+ +S S IW+ F+
Sbjct: 88 TSDCQACLASAANQILTSCNYQSDSRIWYDYCFM 121
>02_05_1349 +
35841694-35843738,35844506-35844624,35844932-35845075,
35845189-35845310,35845474-35845609,35845861-35845957,
35846727-35846899,35847099-35847262,35847466-35847537,
35847833-35847928,35847999-35848124
Length = 1097
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 83 SNMPNSAAAAYTAACQDSANAGSKELPAA-QRYLAQYYLRFSLLDLASHY 229
S S+ A A Q A+ + L AA L YYLR S LDLA H+
Sbjct: 32 SRQQPSSGWARALASQLHADVAKRPLSAAASNSLLCYYLRSSRLDLALHH 81
>07_03_1160 - 24430240-24431268
Length = 342
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 284 KIISERRLAPSSSQSGNTPEDL---PDAIKNVSTVSLIQDTPKTP-LPSPDVTPDN 439
+I+ E P + P L PD + N + L Q TP P LP+PDV P N
Sbjct: 30 RILQEAAWPPYDYPKPDQPPPLLPTPDVVPNPNQPPL-QPTPGVPPLPNPDVPPMN 84
>05_01_0565 - 4926137-4926847,4926928-4927257
Length = 346
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 284 KIISERRLAPSSSQSGNTPEDLPDAIKNVSTVSLIQDTPKTPLPSPDVTPD 436
K++S + P+ P D A ST++ I DTP P+ + + D
Sbjct: 234 KVVSRTKTTPNPKPQAPVPHDGRKADMVKSTLAGIHDTPAKPIRAAPTSSD 284
>03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648
Length = 587
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -1
Query: 145 SIGRILTGCSVRSRSTIWHIRLFI*LG*FKQSHAFNITSTVSF 17
++G +TG ++ + S++W + + LG S AFN+ S + F
Sbjct: 460 TLGTTITGGAISAMSSLWMVPQLMVLG---LSEAFNLISQIEF 499
>12_01_0740 + 6646471-6649407
Length = 978
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 308 APSSSQSGNTPEDLPDAIKNVSTVSLIQDTPKTPLPS 418
A +S SGN P + DAIK++ + L + +PS
Sbjct: 596 ASDNSLSGNIPSSICDAIKSLQLLDLSNNNLTGSMPS 632
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 308 APSSSQSGNTPEDLPDAIKNVSTVSLIQDTPKTPLPS 418
A +S SGN P + DAIK++ + L + +PS
Sbjct: 637 ASDNSLSGNIPSSICDAIKSLQLLDLSNNNLTGSMPS 673
>08_02_0772 + 21035762-21037567
Length = 601
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 SNMPNSAAAAYTAACQDSANAGSKELPAAQ-RYLAQYYLRFSLL 211
S+ P+SAAAA TA+ + + + LPAA+ L + LR LL
Sbjct: 11 SSPPSSAAAAATASAAAALLSSTSPLPAARFLQLHAHLLRTGLL 54
>08_01_0961 -
9622444-9622928,9623011-9623102,9623862-9624002,
9624460-9624506,9624581-9624639,9624780-9624940,
9625021-9625196,9625284-9625355,9625820-9625879,
9625997-9626191
Length = 495
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 254 CTKEVGKSILKIISERRLAPSSSQSGNTPEDLPDAIKNVSTVSLIQD 394
CT E K ++ RRL + S G TP L + V L+ D
Sbjct: 156 CTDETNKEAFDAVALRRLINNKSDGGVTPLHLAALHGHAECVQLLLD 202
>07_03_0438 -
18200329-18200430,18201203-18201335,18201964-18202034,
18202377-18202466,18203200-18203288,18203886-18203961,
18204094-18204264
Length = 243
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 278 ILKIISERRLAPSSSQSGNTPEDLPDAIKNVSTVSLI 388
+L++ + L S SGN P LPD ++ + +S++
Sbjct: 69 VLRLFAYGTLKDYKSNSGNLPALLPDQVRKLKQLSVL 105
>07_01_0677 +
5087584-5087589,5088890-5089172,5093561-5093704,
5094167-5095269
Length = 511
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 272 KSILKIISERRLAPSSSQSGNTPEDLPDAIKNV-STVSLIQDTPKTP 409
+ +LK+I + +GNTP L + +V ST++L++D P
Sbjct: 249 RGLLKVIGPAEVINQGDSAGNTPLHLAAKMAHVQSTLTLLKDPRVNP 295
>04_01_0450 -
5840015-5840055,5840635-5840977,5841326-5841537,
5842381-5842477
Length = 230
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 227 YAYKCLDHDCTKEVGKSILKIISE-RRLAPSSSQSGNTPEDLPDAIKNVSTVS 382
+A +C + EVG+ +LK ++E +R +S+ GN + P+ ++ T S
Sbjct: 81 HASRCQLTEHMAEVGREVLKEMAEGKRKGGPTSRGGNGSDTPPECDRSPETTS 133
>01_07_0357 +
43032552-43033034,43034054-43034383,43035210-43035325,
43035589-43035679,43035790-43035860,43036202-43036258,
43036809-43036860,43037139-43037170,43037686-43037753,
43038148-43038353
Length = 501
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 380 SLIQDTPKTPLPSPDVTP 433
+LI TPK PLP+P V P
Sbjct: 186 TLIDITPKDPLPTPSVGP 203
>11_04_0106 - 13512681-13513198,13513304-13513484
Length = 232
Score = 26.6 bits (56), Expect = 9.0
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 98 SAAAAYTAACQDSANAGSKELPAAQRYLAQYYLRFSLLDLASHYAYKCLDHDCTKEVGKS 277
S A + A + AN S+ PAAQ + A ++ S+ ++ + + K L + G+
Sbjct: 36 SLLAGSSGAAVEPAN--SRPSPAAQEH-ANHHGGCSIREVTAERS-KLLHIAAGEGHGEL 91
Query: 278 ILKIIS-ERRLAPSSSQSGNTP 340
I ++ S + L SSS SGNTP
Sbjct: 92 IAELCSHDSSLLSSSSSSGNTP 113
>08_01_0351 +
3095639-3095995,3096134-3096187,3096407-3096490,
3096972-3097097,3097174-3097241,3097324-3097393,
3097597-3097662,3098404-3098454
Length = 291
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 83 SNMPNSAAAAYTAACQDSANAGSKELPAAQRYLAQYYL 196
S+ ++AAAA TAA + A G K+L A + L +Y L
Sbjct: 76 SSSSSAAAAAATAAAVEEARQGRKQLGATTQ-LYEYLL 112
>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
35714942-35715135,35715237-35716786,35716946-35717049,
35717258-35717399,35717692-35717910
Length = 1535
Score = 26.6 bits (56), Expect = 9.0
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 272 KSILKIISERRLAPSSSQSGNTPEDLPDAIKNVSTVSLIQDTPKTPLPSPDVTPDNFS 445
K K+ E + P S + E + S V+ +QDT KTP D + +FS
Sbjct: 1101 KGSFKLQDEHTMTPISRNKVDIAEKSTCYVAGESMVADLQDTNKTPSDPRDGSISSFS 1158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,666,251
Number of Sequences: 37544
Number of extensions: 223773
Number of successful extensions: 733
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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