Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_E18
         (345 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...    55   2e-08
U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...    53   5e-08
Z54281-4|CAA91049.1|  199|Caenorhabditis elegans Hypothetical pr...    31   0.29 
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    29   0.89 
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr...    28   1.6  
U80839-6|AAB37917.2|  301|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AL117204-35|CAB55154.2|  861|Caenorhabditis elegans Hypothetical...    27   2.7  
AF016449-2|AAG24006.1|  333|Caenorhabditis elegans Seven tm rece...    27   4.8  
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr...    26   6.3  
U80448-9|AAB37822.2|  577|Caenorhabditis elegans Hypothetical pr...    26   6.3  
Z74033-7|CAA98472.2|  325|Caenorhabditis elegans Hypothetical pr...    26   8.3  
Z50177-1|CAA90543.2|  607|Caenorhabditis elegans Hypothetical pr...    26   8.3  

>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score = 54.8 bits (126), Expect = 2e-08
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +1

Query: 10  WSLIDNFEWMRGFSERFGLYEVDYASQKKARTARISATYYAHVIK 144
           W+L+DNFEW  GF  +FGL EVD+ S  K RT + SA +Y   IK
Sbjct: 423 WTLMDNFEWDDGFELKFGLCEVDFESPDKTRTMKKSAYFYKEFIK 467


>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 10  WSLIDNFEWMRGFSERFGLYEVDYASQKKARTARISATYYAHVIKT-KCIHN 162
           W+L+DNFEW  GF  +FG+  VD+ S  K RT + SA YY   I+  K  HN
Sbjct: 426 WTLMDNFEWDDGFGVKFGICRVDFDSPDKTRTMKYSAKYYQTFIREFKKHHN 477


>Z54281-4|CAA91049.1|  199|Caenorhabditis elegans Hypothetical
           protein F46C5.7 protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 309 CELYYFDHILIMFSMVSLICVIFFGETIKSPQFIHIHILN-VFVSVI 172
           C + +F  I+  F  V L    +FG     P  +H+H L+  F+S++
Sbjct: 56  CFVIFFLMIIASFVFVLLYLEFYFGSVYNCPALLHLHTLSAAFMSMV 102


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein
            F09C3.1 protein.
          Length = 1391

 Score = 29.1 bits (62), Expect = 0.89
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 154  IHNKYIDYTYKYV*NMDVYELWTFYCFTK 240
            IHNK+IDY  K V N+ + E+++   FT+
Sbjct: 1038 IHNKFIDYINKNVRNVALDEIYSMNEFTQ 1066


>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
           protein K12D12.2 protein.
          Length = 1696

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 13  SLIDNFE-WMRGFSERFGLYEVDYASQKKARTAR 111
           S +  +E ++R F + + +   DYA QK ARTAR
Sbjct: 424 SALSQYENFLRCFVDLYEMQVTDYAHQKNARTAR 457


>U80839-6|AAB37917.2|  301|Caenorhabditis elegans Hypothetical
           protein ZC204.8 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 31  EWMRGFSERFGLYEVDYASQKKARTARISATYYAHVIKTKCIHNK 165
           +W+RG + R   +   + +  KAR A +   YY  +   K I+++
Sbjct: 232 QWIRGSNPRLQSFRYLFNNFNKARLAFLDGIYYIEIRDKKLINDR 276


>AL117204-35|CAB55154.2|  861|Caenorhabditis elegans Hypothetical
           protein Y116A8C.14 protein.
          Length = 861

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 315 NACELYYFDHILIMFSMVSLICVIFFGET-IKSPQFIHIHILNVF 184
           N    Y F   ++   ++S++ V+FFG   I  P   H + L VF
Sbjct: 802 NKRSFYVFISAIVFSILLSILLVVFFGNVKIDCPWCTHFNCLPVF 846


>AF016449-2|AAG24006.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 244 protein.
          Length = 333

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 273 FSMVSLICVIFFGETIKSPQFIHIHILNVFVSVIDVLIM 157
           FS  S+  VI   E +  PQF  +   N+F S+  V ++
Sbjct: 66  FSHDSIFIVITSSERMLVPQFFQVPFTNIFCSMFGVSLV 104


>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
           protein R134.1 protein.
          Length = 1140

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 243 FFGETIKSPQFIHIHILNVFVSVIDVLIMNTFSFD 139
           F G +I S QFI +  L    S++D+L    FS D
Sbjct: 621 FIGLSIDSSQFISVTKLCSRGSLLDILYKGNFSMD 655


>U80448-9|AAB37822.2|  577|Caenorhabditis elegans Hypothetical
           protein F59A3.8 protein.
          Length = 577

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 2   HEAGVSLITSNGCGDSLNVLAFTKWTTRHRRRLELLA 112
           H  G S +  NG    LN ++ +KW  +H    ELLA
Sbjct: 278 HYQGTSAVHKNGEFQLLNPISLSKWEFQH-EDTELLA 313


>Z74033-7|CAA98472.2|  325|Caenorhabditis elegans Hypothetical
           protein F38B7.4 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +1

Query: 46  FSERFGLYEVDYASQKKARTARISATYYAHVIKTKCIHNKY-IDYTYKYV*NMDV-YELW 219
           F++ F  Y+    + K++R  RI    Y   I+T    + Y ID ++ +  N    Y  W
Sbjct: 210 FAKIFKFYKNQNKTDKESRK-RIKKNIYLF-IQTVLQDSLYLIDISFTFYFNSFYDYRFW 267

Query: 220 TFYCFT 237
           TF+C T
Sbjct: 268 TFFCGT 273


>Z50177-1|CAA90543.2|  607|Caenorhabditis elegans Hypothetical
           protein F46G10.2 protein.
          Length = 607

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 23  ITSNGCGDSLNVLAFTKWTTRHRR--RLELLASPRLITPMSSKLNVFIISTSITLTNTF 193
           +T++G GD L V    KW  + +     + +    L+T M    N  + +  +TL+  F
Sbjct: 86  VTTSGDGDDLIVKGIVKWKVQLKNWSTNDTVVEGFLVTIMDHDTNETVTTYQLTLSEPF 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,351,257
Number of Sequences: 27780
Number of extensions: 137986
Number of successful extensions: 380
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)