Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_E15
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   1.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   3.2  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    20   9.6  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   9.6  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    20   9.6  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    20   9.6  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 238 LXTCFSSSTYHYKHRMANFLFAENIISCLFINCIVI 131
           +  C +  T     R+ N   A   I+ LF+ C+V+
Sbjct: 44  ILVCVAIYTDRGLRRIGNLFLASLAIADLFVGCLVM 79


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 193 FCVYNDRYLKKNTCXENRI 249
           FC    R  K+NT  EN++
Sbjct: 453 FCSTEKRLTKQNTAFENQL 471


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 166 CFLQRGSWPFCVY 204
           CF++ GSW +  Y
Sbjct: 159 CFMKFGSWTYDGY 171


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 89  KKSSRFINKKSLDLY 133
           KK++RF + +S D+Y
Sbjct: 132 KKTTRFQDSRSKDVY 146


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 89  KKSSRFINKKSLDLY 133
           KK++RF + +S D+Y
Sbjct: 132 KKTTRFQDSRSKDVY 146


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 89  KKSSRFINKKSLDLY 133
           KK++RF + +S D+Y
Sbjct: 132 KKTTRFQDSRSKDVY 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,608
Number of Sequences: 438
Number of extensions: 1769
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)