Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E11
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1057 + 27248249-27249001 44 3e-05
02_01_0529 - 3846489-3847268 44 3e-05
03_02_0380 - 7945959-7946699 43 6e-05
09_04_0535 + 18397051-18397644 43 8e-05
08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150 37 0.005
01_05_0464 - 22470963-22472291 32 0.15
01_01_0018 + 139150-140415 31 0.34
12_02_0410 + 18701258-18701327,18701398-18701630,18701782-187026... 29 1.1
01_03_0204 + 13771346-13772680 29 1.4
08_02_0619 - 19382172-19382366,19382453-19382545,19382621-193827... 28 1.8
05_04_0104 + 18021671-18021909,18022102-18022282,18022473-180225... 27 3.2
04_04_0396 + 24915880-24916222,24916318-24916577,24916689-249167... 27 3.2
11_06_0352 + 22599918-22600354,22601231-22601330 27 4.2
10_08_0308 + 16660751-16661450,16661656-16661819,16662615-166628... 27 4.2
04_04_1228 + 31888350-31892228,31892568-31893298,31893511-318935... 27 4.2
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 27 5.6
08_01_0980 + 9877030-9877307,9877727-9877837,9877928-9878009,987... 27 5.6
04_04_1632 - 34926955-34927332 27 5.6
10_08_0392 + 17500748-17500877,17501006-17501280,17501321-175013... 26 7.4
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 26 7.4
06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041... 26 7.4
04_04_0584 + 26381220-26381232,26381583-26381594,26381921-263820... 26 7.4
04_03_0314 - 14238620-14240128 26 7.4
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 26 9.8
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 26 9.8
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394 26 9.8
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 26 9.8
>06_03_1057 + 27248249-27249001
Length = 250
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIMK 350
Q+ LQQFW + + DI++ DFK +LPLARIKKIMK
Sbjct: 77 QRQLQQFWAERLVDIEQTT--DFKNHSLPLARIKKIMK 112
>02_01_0529 - 3846489-3847268
Length = 259
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIMK 350
QQ L++FW M++I++ DFK +LPLARIKKIMK
Sbjct: 81 QQQLREFWANQMEEIEQTT--DFKNHSLPLARIKKIMK 116
>03_02_0380 - 7945959-7946699
Length = 246
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIMK 350
Q LQ FW + ++ +A DFK LPLARIKKIMK
Sbjct: 43 QAQLQAFWAYQRQEAERASASDFKNHQLPLARIKKIMK 80
>09_04_0535 + 18397051-18397644
Length = 197
Score = 42.7 bits (96), Expect = 8e-05
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +3
Query: 222 QAETTQQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIMK 350
QA QQ LQ FW + +I+ DFK LPLARIKKIMK
Sbjct: 52 QAAAAQQQLQMFWAEQYREIEATT--DFKNHNLPLARIKKIMK 92
>08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150
Length = 276
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIMK 350
++ LQ FW M +++++ +FK LPLARIKKIMK
Sbjct: 103 KEQLQAFWADQMAEVEQMT--EFKLPNLPLARIKKIMK 138
>01_05_0464 - 22470963-22472291
Length = 442
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 225 AETTQQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIM 347
A QQ + +FW +I+ DF A+P+AR+KKI+
Sbjct: 15 APKAQQQMDEFWRDRQKEIE--TTKDFSEHAIPMARLKKIV 53
>01_01_0018 + 139150-140415
Length = 421
Score = 30.7 bits (66), Expect = 0.34
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKI 344
QQ + +FW +I+ DF A+P+AR+KKI
Sbjct: 19 QQQMDEFWRDRQKEIE--TTKDFSEHAIPMARLKKI 52
>12_02_0410 +
18701258-18701327,18701398-18701630,18701782-18702639,
18703006-18703865,18704285-18704395,18704486-18704567,
18704643-18704735,18704795-18704989
Length = 833
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -1
Query: 204 YPQSLHLHWRCRLGLKQEQRSTRTSCIKNARRNDLQIVDYSFCF*KKSITNI 49
Y + H+ + C L + + R +KN R L I C+ + S+TN+
Sbjct: 697 YDKDAHMEFLCLLNIAHGRYKKRGGYVKNPSREKLYIRGRWPCYKRPSLTNL 748
>01_03_0204 + 13771346-13772680
Length = 444
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKIM 347
QQ + +FW +I+ DF +P+AR+KKI+
Sbjct: 19 QQQMDEFWRDRQKEIEMTK--DFSEHMIPMARLKKIV 53
>08_02_0619 -
19382172-19382366,19382453-19382545,19382621-19382702,
19382793-19382903,19383323-19383681,19384330-19384533,
19384582-19384756,19384885-19385474,19385555-19385800
Length = 684
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -1
Query: 204 YPQSLHLHWRCRLGLKQEQRSTRTSCIKNARRNDLQIVDYSFCF*KKSITNI 49
Y + ++ + C L L ++ +KN R L I + C+ + S+TN+
Sbjct: 548 YDKDAYMEFLCLLNLAHDRYKKHGGYVKNPSREKLYIRGHWPCYKQPSLTNL 599
>05_04_0104 +
18021671-18021909,18022102-18022282,18022473-18022568,
18022632-18022672,18022761-18022833,18023036-18023749
Length = 447
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 132 MSVCFFVPASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDD 278
+ + F VP SDQ E ++DN E ++A Q +F + + DD
Sbjct: 362 LMLLFLVPQSDQNSMLLPAEMLQDN--ESTEARKGGQDTAEFSVLVADD 408
>04_04_0396 +
24915880-24916222,24916318-24916577,24916689-24916784,
24916889-24917059,24917262-24917975
Length = 527
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 132 MSVCFFVPASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDD 278
+ + F VP SDQ E ++DN E ++A Q +F + + DD
Sbjct: 442 LMLLFLVPQSDQNSMLLPAEMLQDN--ESTEARKGGQDTAEFSVLVADD 488
>11_06_0352 + 22599918-22600354,22601231-22601330
Length = 178
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 219 NPHRHYPQSLHLHWRCRLGLK--QEQRSTRTSCIKNARRNDLQIVD 88
+P+R P + WRC G+K Q + + R S + +R+ +QI +
Sbjct: 91 HPNRLVPVTPSRQWRCSSGVKENQNENTERNSFSRLNQRDAMQIFE 136
>10_08_0308 +
16660751-16661450,16661656-16661819,16662615-16662800,
16663297-16663533
Length = 428
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 168 AGTSNAGEEIEDNVGEDSQAETTQQ 242
AGT N +E+E+ GE+ +A Q+
Sbjct: 217 AGTDNDNDEVEERQGEEGRARNLQK 241
>04_04_1228 +
31888350-31892228,31892568-31893298,31893511-31893586,
31894089-31894164,31894571-31894656,31895414-31895482,
31895579-31895588,31895711-31896207
Length = 1807
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDFKTQALPLAR 332
Q+ + ++ I+DDI K +DD+K LPL +
Sbjct: 393 QRLKSKRFLLILDDIWKCQSDDWKKLLLPLTK 424
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 166 KPAPPMQVKRLRIMSVRIHRRRQLNKHFNNFGSK*WMI 279
KP + ++ S+ + RR LN H +N K W +
Sbjct: 849 KPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKL 886
>08_01_0980 +
9877030-9877307,9877727-9877837,9877928-9878009,
9878085-9878177,9878262-9878456
Length = 252
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -1
Query: 204 YPQSLHLHWRCRLGLKQEQRSTRTSCIKNARRNDLQIVDYSFCF*KKSITNI 49
Y + ++ + C L L + R +KN R L I C+ + S+TN+
Sbjct: 116 YGKDAYMEFLCLLNLAHGRYKKRGGYVKNPSREKLYIRGRWPCYKQPSLTNL 167
>04_04_1632 - 34926955-34927332
Length = 125
Score = 26.6 bits (56), Expect = 5.6
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 315 ALPLARIKKIMK 350
ALPLARIKKIMK
Sbjct: 23 ALPLARIKKIMK 34
>10_08_0392 +
17500748-17500877,17501006-17501280,17501321-17501388,
17501516-17501632,17501802-17501943,17502622-17502912,
17503507-17503650
Length = 388
Score = 26.2 bits (55), Expect = 7.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 317 CLGFEIISIYLLDIIHYFDP 258
CLGF + Y IH+ DP
Sbjct: 111 CLGFNSVGFYQASTIHFADP 130
>08_01_0540 +
4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/71 (19%), Positives = 32/71 (45%)
Frame = +3
Query: 126 YKMSVCFFVPASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDDIKKINADDF 305
Y + + + +++ NA ++ + GE+S A ++ + K KK+ D
Sbjct: 652 YDVVITTYTIVANEVPKQNADDDTDQKNGEESSAGNKRKQPPKAQSKSKKKKKKLKDSDI 711
Query: 306 KTQALPLARIK 338
+ P+AR++
Sbjct: 712 YLASGPVARVR 722
>06_02_0023 +
10702040-10702364,10702530-10702747,10703643-10704190,
10704272-10704523,10704611-10704721,10704812-10704893,
10704969-10705061,10705146-10705340
Length = 607
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = -1
Query: 204 YPQSLHLHWRCRLGLKQEQRSTRTSCIKNARRNDLQIVDYSFCF*KKSITNI 49
Y + ++ + C L L + R +KN R L + C+ + S+TN+
Sbjct: 471 YDKDAYMEFLCFLNLAHGRYKKRGGYVKNPSREKLYVRGRWPCYKQPSLTNL 522
>04_04_0584 +
26381220-26381232,26381583-26381594,26381921-26382028,
26382137-26382217,26382320-26382465,26382550-26382624,
26382709-26382756,26382845-26382994,26383081-26383140,
26383394-26384274,26384674-26385670,26385887-26385895
Length = 859
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 117 HF*YKMSVCFFVPASDQAGTSNAGEEIEDNVGEDSQAETTQQT 245
HF K + Q T A E++E +VG QAETT +T
Sbjct: 227 HFTTKEGTSNMLQQDSQINTITAIEQVEQHVG---QAETTSET 266
>04_03_0314 - 14238620-14240128
Length = 502
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 162 DQAGTSNAGEEIED-NVGEDSQAETTQQTLQQFWIK 266
+ G EE+ D G D A+ L++FW+K
Sbjct: 450 EDGGIGEDWEEVGDLGEGSDDDADAELDALEEFWVK 485
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 177 SNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDDIKKINADDFKTQALPL 326
SN E N+ + Q + +Q + ++ ++DD+ +I DD+K PL
Sbjct: 394 SNQSHEGISNL-DTLQQDLEEQMKSKKFLIVLDDVWEIRTDDWKKLLAPL 442
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 222 QAETTQQTLQQFWIKIMDDIKKINADDFKTQALPLARIKKI 344
Q E+ Q +L++ +I+ + IKK ADD Q L A I
Sbjct: 755 QHESIQTSLKKGYIQDHNSIKKTVADDVSVQRLQRAAASAI 795
>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
Length = 1456
Score = 25.8 bits (54), Expect = 9.8
Identities = 6/34 (17%), Positives = 20/34 (58%)
Frame = +3
Query: 198 EDNVGEDSQAETTQQTLQQFWIKIMDDIKKINAD 299
++ G + + + +++ W+K++ +KK++ D
Sbjct: 1232 QETKGTGEETDKVLEAIREMWLKLLQALKKLSLD 1265
>02_05_0366 - 28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 25.8 bits (54), Expect = 9.8
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +3
Query: 66 FFKNKKNNQQFGGHCALHF*YKMSVCFFVPASDQAGTSNAGEEIEDNVGEDSQAETTQQT 245
FFK + F GH +LH + C S AG SN NV ++ +
Sbjct: 1360 FFKKLDPMEFFSGHSSLHAENQQKDC-----SLSAGPSNGTNLALSNVDVEAAIRQAEDE 1414
Query: 246 LQQFWIKIMDDIKKINADDFKTQA 317
+K ++ + ++ +F +A
Sbjct: 1415 ADYMALKRLEQEEAVDNQEFSEEA 1438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,907,885
Number of Sequences: 37544
Number of extensions: 158731
Number of successful extensions: 415
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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