Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E11
(354 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans N... 29 0.71
AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical... 27 5.0
AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin... 27 5.0
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 26 6.6
U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical p... 26 6.6
AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical ... 26 6.6
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 26 6.6
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 26 8.7
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 26 8.7
AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical... 26 8.7
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 26 8.7
>AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans
NFYC-1 protein protein.
Length = 232
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 237 QQTLQQFWIKIMDDIKKINADDF----KTQALPLARIKKIMKL 353
+Q + FW + + +I+ +D K ++P+AR+KKIM++
Sbjct: 79 RQMTEDFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRI 121
>AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical
protein Y18D10A.12 protein.
Length = 228
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 228 PPVNPHRHYPQSLHLHWRCRLGLKQEQRSTRTSCIKNARRNDLQIVDYSFC 76
PP +P PQ + C G R TSCIK + Q S C
Sbjct: 48 PPHSPRPPRPQPVQPRPECESGWTSYNRPQGTSCIKVFYASTSQSTAESLC 98
>AC024785-6|AAF60605.2| 467|Caenorhabditis elegans C-type lectin
protein 74 protein.
Length = 467
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 67 FSKTKRIINNLEVIAPCIFNTRCPCASLFLLQTKPAP 177
F+ T R N L+VI NT+ PC S ++ +K P
Sbjct: 242 FNDTTRGSNVLDVIDMFYNNTQTPCGSFVIVLSKRYP 278
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 156 ASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQ 254
A D+ GTSN EE+ D D + T + Q+
Sbjct: 559 AQDEDGTSNEAEELLDEEDLDEDEDETAEEKQE 591
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 156 ASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQ 254
A D+ GTSN EE+ D D + T + Q+
Sbjct: 559 AQDEDGTSNEAEELLDEEDLDEDEDETAEEKQE 591
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 156 ASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQ 254
A D+ GTSN EE+ D D + T + Q+
Sbjct: 559 AQDEDGTSNEAEELLDEEDLDEDEDETAEEKQE 591
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 156 ASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQ 254
A D+ GTSN EE+ D D + T + Q+
Sbjct: 559 AQDEDGTSNEAEELLDEEDLDEDEDETAEEKQE 591
>U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical
protein C37C3.3 protein.
Length = 265
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 105 HCALHF*YKMSVC--FFVPASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDD 278
HC ++F KMS+ FF +A + ++++ + + E + Q+F K +DD
Sbjct: 40 HCFIYFLQKMSLFSKFFGGMMQEAPITP-----QESIQKLRETEDILEKKQEFLEKKIDD 94
Query: 279 IKKINADDFKTQ 314
++K NA + T+
Sbjct: 95 VRKQNAVKYGTK 106
>AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical
protein Y82E9BR.7 protein.
Length = 536
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +1
Query: 115 CIFNTRCPCASL 150
C+ N++CPCASL
Sbjct: 151 CVKNSKCPCASL 162
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 156 ASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQ 254
A D+ GTSN EE+ D D + T + Q+
Sbjct: 563 AQDEDGTSNEAEELLDEEDLDEDEDETAEEKQE 595
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 192 EIEDNVGEDSQAETTQQTLQQFWIKIMDDIKKINADDFKT 311
+ +D+ GE+ Q + +Q L+ K+ D+KK A+ KT
Sbjct: 635 DFQDSPGEEDQLQELEQLLKADMKKVAKDLKK--AESCKT 672
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 192 EIEDNVGEDSQAETTQQTLQQFWIKIMDDIKKINADDFKT 311
+ +D+ GE+ Q + +Q L+ K+ D+KK A+ KT
Sbjct: 635 DFQDSPGEEDQLQELEQLLKADMKKVAKDLKK--AESCKT 672
>AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical
protein F33D4.6a protein.
Length = 396
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 147 FVPASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDDIKK 287
FV DQ NA E E E + E ++ + F K +DD+KK
Sbjct: 92 FVSEKDQKIQKNA-EVSEKKKEETERVEKKKEDDESFSFKTVDDVKK 137
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 147 FVPASDQAGTSNAGEEIEDNVGEDSQAETTQQTLQQFWIKIMDDIKK 287
FV DQ NA E E E + E ++ + F K +DD+KK
Sbjct: 92 FVSEKDQKIQKNA-EVSEKKKEETERVEKKKEDDESFSFKTVDDVKK 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,705,646
Number of Sequences: 27780
Number of extensions: 142364
Number of successful extensions: 350
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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