Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E10
(361 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 131 2e-31
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 124 2e-29
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 119 6e-28
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 115 1e-26
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 83 6e-17
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 70 6e-13
05_06_0043 + 25143513-25143866,25144010-25144191,25144284-251443... 29 1.5
04_04_1066 - 30533114-30533185,30533507-30533614,30533716-305340... 28 1.9
03_01_0579 - 4274927-4274998,4275320-4275427,4275529-4275904,427... 28 1.9
01_01_0527 + 3867621-3867764,3867855-3868128,3868216-3868315,386... 28 1.9
03_06_0026 - 31118997-31119113,31119700-31119900,31120032-311202... 27 3.4
11_06_0461 + 23856949-23857004,23859814-23859886,23860040-23861398 27 4.4
04_04_0725 - 27581658-27581663,27582379-27582481,27582697-275830... 27 4.4
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16... 27 5.9
08_02_0972 - 23187294-23188034 27 5.9
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 27 5.9
11_06_0249 + 21697863-21697923,21698119-21698128,21698160-216987... 26 7.7
10_08_0002 - 13986969-13989338 26 7.7
07_01_0117 + 894314-896677 26 7.7
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 131 bits (316), Expect = 2e-31
Identities = 61/115 (53%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Frame = +3
Query: 18 KKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 197
KKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG + WD
Sbjct: 152 KKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWD 211
Query: 198 FLPPFTIKDPEAKKPEDWXXXXXX-XXXXXXXXXXXXXXXHIPDPDASKPEDWDD 359
LPP IKDPEAKKPEDW IPDPDA KPEDWDD
Sbjct: 212 ILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDD 266
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 124 bits (300), Expect = 2e-29
Identities = 56/115 (48%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Frame = +3
Query: 18 KKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 197
KKVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +LIDN + ++G + DW+
Sbjct: 159 KKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDDWN 218
Query: 198 FLPPFTIKDPEAKKPEDWXXXXXX-XXXXXXXXXXXXXXXHIPDPDASKPEDWDD 359
+PP +DPEAKKPEDW I DP+A+KPEDWDD
Sbjct: 219 IIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPEDWDD 273
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 119 bits (287), Expect = 6e-28
Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = +3
Query: 3 IFGTR-KKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGE 179
I GT+ KK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG
Sbjct: 144 ICGTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGS 203
Query: 180 LEADWDFLPPFTIKDPEAKKPEDWXXXXXXXX-XXXXXXXXXXXXXHIPDPDASKPEDWD 356
+ DWD LPP IKD AKKP+DW IPDP KP+ WD
Sbjct: 204 MYTDWDILPPRKIKDVHAKKPKDWDDREYIEDPDAVKPEGYDSIPKEIPDPKDKKPDTWD 263
Query: 357 D 359
D
Sbjct: 264 D 264
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 115 bits (276), Expect = 1e-26
Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = +3
Query: 18 KKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 197
KK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN + E G + DWD
Sbjct: 150 KKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTDWD 209
Query: 198 FLPPFTIKDPEAKKPEDWXXXXXXXX-XXXXXXXXXXXXXHIPDPDASKPEDWDD 359
LPP IK+ AKKP+DW IPDP KPE WDD
Sbjct: 210 ILPPRKIKESNAKKPKDWDDREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESWDD 264
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 83.0 bits (196), Expect = 6e-17
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +3
Query: 48 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPFTIKDP 227
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPP KDP
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDP 574
Query: 228 EAKK 239
EAKK
Sbjct: 575 EAKK 578
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 69.7 bits (163), Expect = 6e-13
Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Frame = +3
Query: 9 GTRKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID-NEKV 167
G+ KVH I +K GK H +K D +H+YT I+KPDN +L+D EK
Sbjct: 140 GSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKK 199
Query: 168 ESGELEADWDF----LPPFTIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDA 335
++ L AD DF +P TI DP+ KKPEDW IPDPDA
Sbjct: 200 KANFLSAD-DFEPSLIPSKTIPDPDDKKPEDW-----------------DERAKIPDPDA 241
Query: 336 SKPEDWDD 359
KP+DWD+
Sbjct: 242 VKPDDWDE 249
>05_06_0043 +
25143513-25143866,25144010-25144191,25144284-25144374,
25144452-25144568,25144922-25144976,25145008-25145093,
25145190-25145300,25145564-25145608,25145695-25145740,
25146078-25146152,25146902-25146971,25147128-25147437,
25147778-25147851,25147996-25148151,25148416-25148539
Length = 631
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 111 TLIVKPDNTYEVLIDNEKVESGELEADWDFLPPFTIKDPEAKKP 242
T +P++ V D + G A W P+T +DP A+KP
Sbjct: 36 TFRARPNSVSIVRCDADSPPEGSAVAGWAPPGPYTGRDPAARKP 79
>04_04_1066 -
30533114-30533185,30533507-30533614,30533716-30534091,
30534173-30534330,30534416-30534536,30534613-30534831,
30534923-30535022,30535254-30535383,30535474-30535617
Length = 475
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 5 IRHEEEGSRDLQLQREEPFDQEGHPLQGRRLH 100
I+HE E +D+Q EP++ E L G+R +
Sbjct: 413 IQHEIEPPQDIQSMEVEPYNLETSTLSGKRAY 444
>03_01_0579 -
4274927-4274998,4275320-4275427,4275529-4275904,
4275986-4276143,4276229-4276349,4276426-4276644,
4276736-4276835,4276923-4277196,4277287-4277430
Length = 523
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 5 IRHEEEGSRDLQLQREEPFDQEGHPLQGRRLH 100
I+HE E +D+Q EP++ E L G+R +
Sbjct: 461 IQHEIEPPQDIQSMEVEPYNLETSTLSGKRAY 492
>01_01_0527 +
3867621-3867764,3867855-3868128,3868216-3868315,
3868407-3868625,3868702-3868822,3868908-3869065,
3869147-3869522,3869624-3869731,3870053-3870124
Length = 523
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 5 IRHEEEGSRDLQLQREEPFDQEGHPLQGRRLH 100
I+HE E +D+Q EP++ E L G+R +
Sbjct: 461 IQHEIEPPQDIQSMEVEPYNLETSTLSGKRAY 492
>03_06_0026 -
31118997-31119113,31119700-31119900,31120032-31120218,
31120339-31120415,31120738-31120815,31120858-31120974,
31121047-31121175,31121327-31121479,31121589-31122044,
31122122-31122239,31122385-31122575,31123140-31123415,
31123524-31123700,31124040-31124141,31124227-31124459,
31125563-31125764
Length = 937
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 129 DNTYEVLIDNEKVESGELEADWDFLPPFTIKDPE 230
+++ EV +D+E+V E E D L PF DP+
Sbjct: 513 EDSEEVEVDSEEVVEAENEDSEDELDPFVKSDPK 546
>11_06_0461 + 23856949-23857004,23859814-23859886,23860040-23861398
Length = 495
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 17 EEGSRDLQLQREEPFDQEGHPLQ 85
EEG D+ + REE +++ GH ++
Sbjct: 455 EEGLEDIDISREEGWEEGGHSIE 477
>04_04_0725 -
27581658-27581663,27582379-27582481,27582697-27583025,
27583263-27583365,27583490-27583671,27584135-27584324,
27584570-27584665,27584960-27585054,27585396-27585590
Length = 432
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 153 DNEKVESGELEADWDFLPPFTIKDPEAK 236
D E+ E GE+ WD LP + +D ++
Sbjct: 270 DKERRELGEIRKRWDTLPELSAEDERSR 297
>12_01_0022 +
165056-165408,165477-165624,166248-166248,166305-166602,
166819-167387,167554-168377
Length = 730
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +3
Query: 81 CKDDVYTHLYTLIV--KPD-NTYE 143
CK+DV HL TLIV PD N YE
Sbjct: 358 CKEDVLHHLSTLIVLFNPDQNKYE 381
>08_02_0972 - 23187294-23188034
Length = 246
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 220 RIQKQRNLKIGTTNPQSPTRKTRNPRTGTNLSTFRTLMPVSLKI 351
R K+RN++I +T+PQS + R R + + L+P K+
Sbjct: 148 RPPKRRNVRI-STDPQSVAARMRRERISERIRILQRLVPGGTKM 190
>08_02_0733 + 20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 162 KVESGELEADWDFLPPFTIKDPEAKKPED 248
K S L+AD F PF + D E + PE+
Sbjct: 1343 KTRSSRLQADRPFDSPFPVHDHEHEYPEE 1371
>11_06_0249 +
21697863-21697923,21698119-21698128,21698160-21698766,
21699011-21699090,21699182-21699263,21699357-21699428,
21700128-21700406
Length = 396
Score = 26.2 bits (55), Expect = 7.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 208 LLRSRIQKQRNLKIGTTNPQSPTRKTRNPRTGTNLS 315
L +IQ + LK+ TT P+SP R T + S
Sbjct: 292 LEEEKIQLEAKLKLPTTRPKSPKLGRRKASTAADAS 327
>10_08_0002 - 13986969-13989338
Length = 789
Score = 26.2 bits (55), Expect = 7.7
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 60 LIKKDIRCK-DDVYTH--LYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPFTIKDPE 230
L+ D R K D ++T +I+K +N Y + + ++E + D+ ++ PF+ P+
Sbjct: 413 LLLSDCRKKIDGIFTKDSYEQMIIKKENEYHMNVSAFQLEPIGVVPDFPYVAPFSSSVPD 472
Query: 231 A 233
A
Sbjct: 473 A 473
>07_01_0117 + 894314-896677
Length = 787
Score = 26.2 bits (55), Expect = 7.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 296 LGFLVFRVGDCGFVVPIFRFLCFWI 222
LGF+ F++G C + P+F F+ + +
Sbjct: 459 LGFVSFKIGQCCY-KPVFHFMLYCV 482
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,909,079
Number of Sequences: 37544
Number of extensions: 181622
Number of successful extensions: 545
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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