Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_E01
(259 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-7|AAB71044.1| 248|Caenorhabditis elegans Hypothetical ... 26 3.2
U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying defe... 25 5.6
U41029-3|AAF99952.2| 886|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 25 7.4
AF022979-9|AAB69904.1| 466|Caenorhabditis elegans Hypothetical ... 25 7.4
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 25 9.8
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 25 9.8
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical... 25 9.8
AF025451-7|AAB71204.1| 207|Caenorhabditis elegans Hypothetical ... 25 9.8
>AF025468-7|AAB71044.1| 248|Caenorhabditis elegans Hypothetical
protein T27A1.3 protein.
Length = 248
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +3
Query: 24 NFSKINRVPCKQHKT-HELVSHI 89
N+ K N++PC +KT EL+S++
Sbjct: 141 NYKKENKLPCMPYKTSQELISYL 163
>U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying
defective protein 26 protein.
Length = 317
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 99 GQHHQALFSKKIFKNYVTHV 158
GQH+ + KK+F Y TH+
Sbjct: 49 GQHYVLVTKKKMFGGYTTHM 68
>U41029-3|AAF99952.2| 886|Caenorhabditis elegans Hypothetical
protein F47G3.1 protein.
Length = 886
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 98 TELYMAYKFMSFMLFTRNPIYF 33
TE+Y + K+M+ + T NP+YF
Sbjct: 614 TEIYYSLKYMNQIDPTVNPVYF 635
>Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical
protein T25G3.3 protein.
Length = 513
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 45 VPCKQHKTHELVSH 86
+PCK H ELVSH
Sbjct: 214 LPCKYHYAQELVSH 227
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 21 FNFSKINRVPCKQHKTHELVSHIQFSGQHHQALFSKKIF 137
F F +I KQ +E++ HI++ + L K F
Sbjct: 3064 FEFEEIRNDSEKQTNDYEIIDHIKYKTKRRLGLLEPKDF 3102
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 21 FNFSKINRVPCKQHKTHELVSHIQFSGQHHQALFSKKIF 137
F F +I KQ +E++ HI++ + L K F
Sbjct: 3064 FEFEEIRNDSEKQTNDYEIIDHIKYKTKRRLGLLEPKDF 3102
>AF022979-9|AAB69904.1| 466|Caenorhabditis elegans Hypothetical
protein T02B11.6 protein.
Length = 466
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 71 MSFMLFTRNPIYFRKIE 21
MS M+ T +PIYF IE
Sbjct: 272 MSIMIITYSPIYFHTIE 288
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 72 ELVSHIQFSGQHHQALFS-KKIFKNY 146
E VSH+ F+ HQ LFS + ++NY
Sbjct: 1305 EQVSHVFFTIYRHQKLFSGPQKYRNY 1330
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 72 ELVSHIQFSGQHHQALFS-KKIFKNY 146
E VSH+ F+ HQ LFS + ++NY
Sbjct: 1274 EQVSHVFFTIYRHQKLFSGPQKYRNY 1299
>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
protein Y57A10A.15 protein.
Length = 1072
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 69 HELV-SHIQFSGQHHQALFSKKIFKNYVTHVGKNV*NTGG 185
H +V S ++ S H + L +++ + TH GK++ GG
Sbjct: 739 HSVVASQLKISRNHAKVLNYARLYGSGETHAGKHLMRVGG 778
>AF025451-7|AAB71204.1| 207|Caenorhabditis elegans Hypothetical
protein C24H12.8 protein.
Length = 207
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/23 (39%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 24 NFSKINRVPCKQHKT-HELVSHI 89
+++K+N +PC +KT EL+S++
Sbjct: 140 HYNKMNVLPCTSYKTSQELISYL 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,180,724
Number of Sequences: 27780
Number of extensions: 117363
Number of successful extensions: 243
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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