Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D23
         (373 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011432-1|AAR99090.1|  537|Drosophila melanogaster RH67089p pro...   167   5e-42
AE014298-819|AAF46101.1|  537|Drosophila melanogaster CG3011-PA ...   167   5e-42
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.      29   1.5  
BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro...    28   4.5  
AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog...    28   4.5  
AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P...    28   4.5  
AE014134-344|AAF51300.1| 1189|Drosophila melanogaster CG7261-PA ...    28   4.5  

>BT011432-1|AAR99090.1|  537|Drosophila melanogaster RH67089p
           protein.
          Length = 537

 Score =  167 bits (405), Expect = 5e-42
 Identities = 78/95 (82%), Positives = 84/95 (88%)
 Frame = +1

Query: 10  RCLDYKRFRQIADENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGV 189
           R LDY RFRQI D+ GAYLMADMAHV+G+VAAG+IPSPFE  DIVTTTTHKTLRGPRAGV
Sbjct: 262 RLLDYARFRQICDDVGAYLMADMAHVAGIVAAGLIPSPFEWADIVTTTTHKTLRGPRAGV 321

Query: 190 IFFRKGVRSVKANGQKVMYDFEGKINQAVFPGLQG 294
           IFFRKGVRS KANG KV+YD E +INQAVFP LQG
Sbjct: 322 IFFRKGVRSTKANGDKVLYDLEERINQAVFPSLQG 356



 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 296 GPHNHXXXXXXXXMKQATSPEYIEYQ 373
           GPHN+         KQA SPE+  YQ
Sbjct: 357 GPHNNAVAGIATAFKQAKSPEFKAYQ 382


>AE014298-819|AAF46101.1|  537|Drosophila melanogaster CG3011-PA
           protein.
          Length = 537

 Score =  167 bits (405), Expect = 5e-42
 Identities = 78/95 (82%), Positives = 84/95 (88%)
 Frame = +1

Query: 10  RCLDYKRFRQIADENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGV 189
           R LDY RFRQI D+ GAYLMADMAHV+G+VAAG+IPSPFE  DIVTTTTHKTLRGPRAGV
Sbjct: 262 RLLDYARFRQICDDVGAYLMADMAHVAGIVAAGLIPSPFEWADIVTTTTHKTLRGPRAGV 321

Query: 190 IFFRKGVRSVKANGQKVMYDFEGKINQAVFPGLQG 294
           IFFRKGVRS KANG KV+YD E +INQAVFP LQG
Sbjct: 322 IFFRKGVRSTKANGDKVLYDLEERINQAVFPSLQG 356



 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 296 GPHNHXXXXXXXXMKQATSPEYIEYQ 373
           GPHN+         KQA SPE+  YQ
Sbjct: 357 GPHNNAVAGIATAFKQAKSPEFKAYQ 382


>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
          Length = 1047

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = -3

Query: 236 FCPFALTERTPLRKNMTPARGPRSVLCVVVVTMSQCSKGLGITPAATRPDTCAMSAIK*A 57
           F P      T L  N+  +RG  +        ++ CS  +G  PAA   ++ A   +   
Sbjct: 440 FIPLHEDGPTSLSMNIVSSRGSSTT------ALTSCSAAIGTLPAAAPTESAATPLMPLE 493

Query: 56  PFSSAICLNRL*SR 15
           P  S I L RL SR
Sbjct: 494 PLVSKIDLGRLDSR 507


>BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p
           protein.
          Length = 1047

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 140 MSQCSKGLGITPAATRPDTCAMSAIK*APFSSAICLNRL*SR 15
           ++ CS  +G  PAA   ++ A   +   P  S I L RL SR
Sbjct: 466 LTSCSAAIGTLPAAAPTESAATPLMPLEPLVSKIDLGRLDSR 507


>AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog
           protein.
          Length = 1061

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 140 MSQCSKGLGITPAATRPDTCAMSAIK*APFSSAICLNRL*SR 15
           ++ CS  +G  PAA   ++ A   +   P  S I L RL SR
Sbjct: 466 LTSCSAAIGTLPAAAPTESAATPLMPLEPLVSKIDLGRLDSR 507


>AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA
           protein.
          Length = 1047

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 140 MSQCSKGLGITPAATRPDTCAMSAIK*APFSSAICLNRL*SR 15
           ++ CS  +G  PAA   ++ A   +   P  S I L RL SR
Sbjct: 466 LTSCSAAIGTLPAAAPTESAATPLMPLEPLVSKIDLGRLDSR 507


>AE014134-344|AAF51300.1| 1189|Drosophila melanogaster CG7261-PA
           protein.
          Length = 1189

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 268 QAVF-PGLQGRSSQPRHSRDSDCYEAGDFARIY 363
           QA+F   ++G  S  +H RDS CY    FAR Y
Sbjct: 440 QALFYDEMKGYMSVGQHIRDSACYMCWAFARAY 472


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,550,906
Number of Sequences: 53049
Number of extensions: 360919
Number of successful extensions: 1042
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)