Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D20
(436 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 157 3e-39
03_01_0547 + 4093196-4093657,4094267-4095148 157 3e-39
03_01_0544 + 4082528-4082989,4083585-4084466 157 3e-39
03_01_0543 + 4076981-4077442,4078145-4079026 157 3e-39
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 91 4e-19
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 91 5e-19
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 87 8e-18
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 78 3e-15
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 78 3e-15
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 37 0.008
02_04_0462 + 23131433-23132836 34 0.058
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 0.94
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 2.2
03_04_0206 - 18493178-18495310 29 2.2
06_03_1231 + 28580006-28580934,28581810-28582086 28 2.9
03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523 28 2.9
09_04_0094 - 14552970-14553182,14553275-14553679,14553780-145539... 28 3.8
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 28 3.8
02_01_0291 - 1947841-1948896 28 3.8
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 27 5.0
06_03_0748 - 24126603-24128038,24128582-24128897 27 6.6
02_01_0052 + 392339-392395,392604-393400,393520-393634,393831-39... 27 6.6
01_04_0043 + 15375459-15377606 27 6.6
01_01_0126 - 1159370-1159657,1161665-1161811,1162832-1162891,116... 27 6.6
12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 27 8.7
03_03_0053 + 14109636-14109948,14110075-14110302,14112030-141121... 27 8.7
01_01_0785 - 6076089-6077615 27 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 157 bits (382), Expect = 3e-39
Identities = 71/103 (68%), Positives = 87/103 (84%)
Frame = +1
Query: 73 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEI 252
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 253 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 381
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 171 VKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 8 AEGHRDFIKNMITGTSQA 61
A GHRDFIKNMITGTSQA
Sbjct: 92 APGHRDFIKNMITGTSQA 109
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 157 bits (382), Expect = 3e-39
Identities = 71/103 (68%), Positives = 87/103 (84%)
Frame = +1
Query: 73 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEI 252
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 253 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 381
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 171 VKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 8 AEGHRDFIKNMITGTSQA 61
A GHRDFIKNMITGTSQA
Sbjct: 92 APGHRDFIKNMITGTSQA 109
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 157 bits (382), Expect = 3e-39
Identities = 71/103 (68%), Positives = 87/103 (84%)
Frame = +1
Query: 73 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEI 252
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 253 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 381
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 171 VKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 8 AEGHRDFIKNMITGTSQA 61
A GHRDFIKNMITGTSQA
Sbjct: 92 APGHRDFIKNMITGTSQA 109
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 157 bits (382), Expect = 3e-39
Identities = 71/103 (68%), Positives = 87/103 (84%)
Frame = +1
Query: 73 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEI 252
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 253 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 381
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 171 VKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 8 AEGHRDFIKNMITGTSQA 61
A GHRDFIKNMITGTSQA
Sbjct: 92 APGHRDFIKNMITGTSQA 109
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 91.1 bits (216), Expect = 4e-19
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 79 VLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 258
VL+++A GEFE G K GQTREH LLA TLGV +LIV +NKMD +S+ R++EI+
Sbjct: 104 VLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIES 163
Query: 259 EVSSYIKKIGYN-PAAVAFVPISGWHGDNM 345
++ +++ GYN V F+PISG G NM
Sbjct: 164 KMVPFLRSSGYNVKKDVHFLPISGLLGSNM 193
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 11 EGHRDFIKNMITGTSQA 61
+GH+ ++ NMI+G SQA
Sbjct: 84 KGHKSYVPNMISGASQA 100
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 90.6 bits (215), Expect = 5e-19
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +1
Query: 79 VLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 258
VL+++A GEFE G + GQTREH LLA TLGV +L+V +NKMD + +S+ R++EI+
Sbjct: 59 VLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEG 118
Query: 259 EVSSYIKKIGYN-PAAVAFVPISGWHGDNMLEPSTK--MPWFKG 381
++ ++K GYN V F+PISG G NM K W+ G
Sbjct: 119 KMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNCSWWSG 162
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 8 AEGHRDFIKNMITGTSQA 61
A GH+ ++ NMI+G SQA
Sbjct: 38 APGHKSYVPNMISGASQA 55
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 86.6 bits (205), Expect = 8e-18
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Frame = +1
Query: 76 AVLIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEE 249
A+L++ A G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E YS+ RF
Sbjct: 339 AILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKERFNF 396
Query: 250 IKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS--TKM-PWFKG 381
IK ++ ++++ GY +AVA+VPIS +N++ + T++ W+ G
Sbjct: 397 IKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTRLSSWYDG 443
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 14 GHRDFIKNMITGTSQA 61
GH+DF+ NMI+G +Q+
Sbjct: 321 GHKDFVPNMISGATQS 336
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 78.2 bits (184), Expect = 3e-15
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 8/111 (7%)
Frame = +1
Query: 76 AVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 240
A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS+ R
Sbjct: 352 AILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKER 409
Query: 241 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKMPWFKGW 384
FE IK ++ S+++ + ++V ++P+S N+++ PS W++G+
Sbjct: 410 FEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGF 460
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 14 GHRDFIKNMITGTSQA 61
GH+DF+ NMI+G +QA
Sbjct: 334 GHKDFVPNMISGATQA 349
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 78.2 bits (184), Expect = 3e-15
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 8/111 (7%)
Frame = +1
Query: 76 AVLIVAAGTGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 240
A+L+V A TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ YS+ R
Sbjct: 352 AILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKER 409
Query: 241 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKMPWFKGW 384
FE IK ++ S+++ + ++V ++P+S N+++ PS W++G+
Sbjct: 410 FEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGF 460
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 14 GHRDFIKNMITGTSQA 61
GH+DF+ NMI+G +QA
Sbjct: 334 GHKDFVPNMISGATQA 349
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 36.7 bits (81), Expect = 0.008
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 136 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 315
QT+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K G +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGS 229
Query: 316 PISGWHGDN 342
+S G N
Sbjct: 230 ALSALQGTN 238
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 14 GHRDFIKNMITGTSQALG 67
GH D++KNMITG +Q G
Sbjct: 139 GHADYVKNMITGAAQMDG 156
>02_04_0462 + 23131433-23132836
Length = 467
Score = 33.9 bits (74), Expect = 0.058
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 136 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE-EIKKEVSSY 273
QT+EH LLA +GV +++V +NK D + E E+++ +SSY
Sbjct: 173 QTKEHILLAKQVGVPKIVVFLNKKDQVDDEELLQLVELEVRELLSSY 219
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 14 GHRDFIKNMITGTSQALG 67
GH D++KNMITG +Q G
Sbjct: 142 GHADYVKNMITGAAQMDG 159
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 0.94
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 205 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 363
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 318 GYESDGSRIVTNF---LDVGRDFLLDFLKSRLTVWWLSGVHFVYSYNQLLDS 172
G E G RIV +D R+ +L+ L VW G+HFVY + L++
Sbjct: 212 GQELAGVRIVEPLRRCMDRARE-ILEIKTGGLVVWTRGGIHFVYRGSSYLEN 262
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 196 VNKMDSTEPPYSESRFEEIKKEV 264
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 266 LPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVRKERLKVN 421
LP + K+ TI + L + + P C G GW+ + + RL +N
Sbjct: 79 LPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLN 130
>03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523
Length = 164
Score = 28.3 bits (60), Expect = 2.9
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 178 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EP 354
+ L+V + D+T+ SES +I K++ + KKI A V P +N+ E
Sbjct: 85 ESLVVATSSTDATDNSKSESSAPDIDKKIRALKKKIRLAEAQVQGDP------ENLKPEQ 138
Query: 355 STKMPWFKGWLVERK 399
KM +GW E K
Sbjct: 139 LEKMKKIEGWKEELK 153
>09_04_0094 -
14552970-14553182,14553275-14553679,14553780-14553902,
14554156-14554367,14554486-14554514,14554661-14555166
Length = 495
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 193 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 327
G + + PP +++ +E ++ VSS+ G AA A VP G
Sbjct: 43 GTSSSTAAAPPPTDAALQEFRRWVSSHGADAGAGAAAPAAVPEGG 87
>02_05_1276 + 35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 417 TFSLSFLTLNQPSLEPWHFGGRLQHVISVPARN 319
T L +L QP L W GG ++SVPA N
Sbjct: 1099 TAPLKYLE-EQPELTAWLVGGTALQIVSVPALN 1130
>02_01_0291 - 1947841-1948896
Length = 351
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 7 GRGTQRFHQEHDHWN-VSSFGXXCAV 81
G GT RFH E W+ V+S G CA+
Sbjct: 197 GVGTYRFHTERGEWSAVASGGEWCAM 222
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 383 HPLNHGILVDGSNMLSPCQPEMGTKATAAG 294
HP + +L G N L+ C P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>06_03_0748 - 24126603-24128038,24128582-24128897
Length = 583
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 226 YSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 318
+S RF KK++++ IK+I + A FVP
Sbjct: 464 HSSERFHPSKKDINAKIKEIFVDIKAAGFVP 494
>02_01_0052 +
392339-392395,392604-393400,393520-393634,393831-393926,
394008-394079,395286-395381
Length = 410
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 114 FEFTSTSGDN-KHGAGXPKA*DVPVIMFLMKSLCPSADS 1
F+ T +SG + K+G PK P+ FL+K++ P++ S
Sbjct: 202 FDSTESSGPHSKNGKHAPKRVQGPMDKFLIKNVSPTSTS 240
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 321 NGYESDGSRIVTNFLDVGRDFLLDFLKSRLTVWWLSGVHF 202
+G + V ++ FL DFL S+LTV++ SG F
Sbjct: 288 DGLLGESHERVFRVIETELSFLADFLYSKLTVFYASGWWF 327
>01_01_0126 -
1159370-1159657,1161665-1161811,1162832-1162891,
1163021-1163203,1163336-1163569
Length = 303
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 232 ESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKA 411
E R KK ++ +++ + IS G++ EPSTK P+F + V+ + A
Sbjct: 227 EGRLSWKKKILAFIFERVRIKVGPFGPLEISLGGGNDGREPSTKDPFFVWFYVDEEIAVA 286
Query: 412 EGK 420
+G+
Sbjct: 287 QGR 289
>12_01_0314 -
2395113-2395760,2396151-2396738,2397218-2397252,
2397546-2397632,2397913-2397985,2398648-2398714,
2398795-2398931,2400196-2400217,2400733-2400807,
2402281-2402365,2402605-2403334
Length = 848
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 314 YPFLAGTEITCWSRPPKCHGSRD 382
Y F+ + CWSR P SRD
Sbjct: 755 YVFILVLAMICWSRSPSAFSSRD 777
>03_03_0053 +
14109636-14109948,14110075-14110302,14112030-14112181,
14112305-14112578,14112687-14112739
Length = 339
Score = 26.6 bits (56), Expect = 8.7
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -2
Query: 426 KAFTFSLSFL-TLNQPSLEPWHFGGRLQHVISVPAR-NGYESDGSRIVTNFLDVGRDFLL 253
+ F+F S T N ++ P RL + + R G SDG IV ++G FL
Sbjct: 54 RMFSFGDSITDTGNSATISPNASFNRLPYGETFFGRPTGRYSDGRLIVDFLAELGLPFLT 113
Query: 252 DFLKSRLTV 226
FL+ R TV
Sbjct: 114 PFLRGRETV 122
>01_01_0785 - 6076089-6077615
Length = 508
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 206 WTPLSHHTVSLDLRKSRRKSLPTSRKLVTIRLPSLSYPFLAGTE--ITCWSRPPK 364
W+P S ++ + + + +R++V R P+ P +AG E +T W PK
Sbjct: 342 WSPESGEPITAEKIAEMKYTQAVAREVVRHRPPATLVPHIAGEEFQLTEWYTIPK 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,650,918
Number of Sequences: 37544
Number of extensions: 266297
Number of successful extensions: 931
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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