Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D19
         (359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001133-1|AAH01133.1|  526|Homo sapiens asparagine-linked glyco...    99   4e-21
AJ224875-1|CAA12176.1|  532|Homo sapiens glucosyltransferase pro...    99   4e-21
BC001253-1|AAH01253.1|  507|Homo sapiens asparagine-linked glyco...    41   0.001
AF102851-1|AAD41466.1|  507|Homo sapiens dolichyl-P-Glc:Man9GlcN...    41   0.001
AF063604-1|AAG43163.1|  507|Homo sapiens brain my046 protein pro...    41   0.001
AL592218-4|CAM27132.1|  509|Homo sapiens asparagine-linked glyco...    40   0.002
AL592218-3|CAI18961.1|  507|Homo sapiens asparagine-linked glyco...    40   0.002
AL049636-4|CAM28310.1|  509|Homo sapiens asparagine-linked glyco...    40   0.002
AL049636-3|CAI22829.1|  507|Homo sapiens asparagine-linked glyco...    40   0.002

>BC001133-1|AAH01133.1|  526|Homo sapiens asparagine-linked
           glycosylation 8 homolog (S. cerevisiae,
           alpha-1,3-glucosyltra protein.
          Length = 526

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 45/87 (51%), Positives = 61/87 (70%)
 Frame = +3

Query: 15  EGSMTGGLVQEFEHAVLPSIKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVV 194
           + SMT GLVQ+F+H VLPS+ P  T I T +++ P++  LW+     R     FLRCL +
Sbjct: 313 KASMTSGLVQQFQHTVLPSVTPLATLICTLIAILPSIFCLWFKPQGPR----GFLRCLTL 368

Query: 195 CSTCSFMFGWHVHEKAILLILVPMSII 275
           C+  SFMFGWHVHEKAILL ++PMS++
Sbjct: 369 CALSSFMFGWHVHEKAILLAILPMSLL 395


>AJ224875-1|CAA12176.1|  532|Homo sapiens glucosyltransferase
           protein.
          Length = 532

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 45/87 (51%), Positives = 61/87 (70%)
 Frame = +3

Query: 15  EGSMTGGLVQEFEHAVLPSIKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVV 194
           + SMT GLVQ+F+H VLPS+ P  T I T +++ P++  LW+     R     FLRCL +
Sbjct: 319 KASMTSGLVQQFQHTVLPSVTPLATLICTLIAILPSIFCLWFKPQGPR----GFLRCLTL 374

Query: 195 CSTCSFMFGWHVHEKAILLILVPMSII 275
           C+  SFMFGWHVHEKAILL ++PMS++
Sbjct: 375 CALSSFMFGWHVHEKAILLAILPMSLL 401


>BC001253-1|AAH01253.1|  507|Homo sapiens asparagine-linked
           glycosylation 6 homolog (S. cerevisiae,
           alpha-1,3-glucosyltra protein.
          Length = 507

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 291 ILPRHIQLIMSFCFTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 345

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 346 KSILLVSLPVCLV 358


>AF102851-1|AAD41466.1|  507|Homo sapiens
           dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl
           glucosyltransferase protein.
          Length = 507

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 291 ILPRHIQLIMSFCFTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 345

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 346 KSILLVSLPVCLV 358


>AF063604-1|AAG43163.1|  507|Homo sapiens brain my046 protein
           protein.
          Length = 507

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 291 ILPRHIQLIMSFCFTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 345

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 346 KSILLVSLPVCLV 358


>AL592218-4|CAM27132.1|  509|Homo sapiens asparagine-linked
           glycosylation 6 homolog (S. cerevisiae,
           alpha-1,3-glucosyltra protein.
          Length = 509

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 293 ILPRHIQLIMSFCSTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 347

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 348 KSILLVSLPVCLV 360


>AL592218-3|CAI18961.1|  507|Homo sapiens asparagine-linked
           glycosylation 6 homolog (S. cerevisiae,
           alpha-1,3-glucosyltra protein.
          Length = 507

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 291 ILPRHIQLIMSFCSTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 345

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 346 KSILLVSLPVCLV 358


>AL049636-4|CAM28310.1|  509|Homo sapiens asparagine-linked
           glycosylation 6 homolog (S. cerevisiae,
           alpha-1,3-glucosyltra protein.
          Length = 509

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 293 ILPRHIQLIMSFCSTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 347

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 348 KSILLVSLPVCLV 360


>AL049636-3|CAI22829.1|  507|Homo sapiens asparagine-linked
           glycosylation 6 homolog (S. cerevisiae,
           alpha-1,3-glucosyltra protein.
          Length = 507

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  VLPS-IKPNVTFILTCLSMAPALVKLWWLCADRRYRNMNFLRCLVVCSTCSFMFGWHVHE 236
           +LP  I+  ++F  T LS+ PA +KL    + +      F   LV C+   F+F + VHE
Sbjct: 291 ILPRHIQLIMSFCSTFLSLLPACIKLILQPSSK-----GFKFTLVSCALSFFLFSFQVHE 345

Query: 237 KAILLILVPMSII 275
           K+ILL+ +P+ ++
Sbjct: 346 KSILLVSLPVCLV 358


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,455,244
Number of Sequences: 237096
Number of extensions: 1292575
Number of successful extensions: 2876
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2874
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)