Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D17
(508 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 258 2e-69
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 258 2e-69
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 243 1e-64
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 237 5e-63
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 219 2e-57
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 142 2e-34
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me... 28 8.3
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro... 28 8.3
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ... 28 8.3
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 258 bits (633), Expect = 2e-69
Identities = 123/168 (73%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAED 183
+ P+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAED
Sbjct: 34 KAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAED 93
Query: 184 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQ 363
VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQ
Sbjct: 94 VQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQ 153
Query: 364 RKTCYAQHTQVRAIRKKMCEIVTRDVTSSELREVVNKLIPDSIAKDIE 507
RKTCYAQ +QVR IR +M +I+T +V+ ++L+++VNKL DSIAKDIE
Sbjct: 154 RKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIE 201
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 258 bits (633), Expect = 2e-69
Identities = 123/168 (73%), Positives = 142/168 (84%)
Frame = +1
Query: 4 RGPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAED 183
+ P+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAED
Sbjct: 34 KAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAED 93
Query: 184 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQ 363
VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQ
Sbjct: 94 VQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQ 153
Query: 364 RKTCYAQHTQVRAIRKKMCEIVTRDVTSSELREVVNKLIPDSIAKDIE 507
RKTCYAQ +QVR IR +M +I+T +V+ ++L+++VNKL DSIAKDIE
Sbjct: 154 RKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIE 201
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 243 bits (594), Expect = 1e-64
Identities = 119/170 (70%), Positives = 138/170 (81%), Gaps = 2/170 (1%)
Frame = +1
Query: 4 RGPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADSDAERSFRKFRLIAE 180
+ P+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE
Sbjct: 34 KAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAE 93
Query: 181 DVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLS 360
DVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD S
Sbjct: 94 DVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQS 153
Query: 361 QRKTCYAQHTQVRAIRK-KMCEIVTRDVTSSELREVVNKLIPDSIAKDIE 507
QRKTCYA +QVR IR +M +I+T +V+ ++L+++VNKL DSIAKDIE
Sbjct: 154 QRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAKDIE 203
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 237 bits (581), Expect = 5e-63
Identities = 111/155 (71%), Positives = 131/155 (84%)
Frame = +1
Query: 4 RGPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAED 183
+ P+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAED
Sbjct: 34 KAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAED 93
Query: 184 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQ 363
VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQ
Sbjct: 94 VQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQ 153
Query: 364 RKTCYAQHTQVRAIRKKMCEIVTRDVTSSELREVV 468
RKTCYAQ +QVR IR +M +I+T +V+ ++L++++
Sbjct: 154 RKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 219 bits (535), Expect = 2e-57
Identities = 104/138 (75%), Positives = 118/138 (85%)
Frame = +1
Query: 94 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 273
GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 274 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIVTRDVTSSE 453
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +I+T +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 454 LREVVNKLIPDSIAKDIE 507
L+++VNKL DSIAKDIE
Sbjct: 134 LKQLVNKLALDSIAKDIE 151
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 142 bits (344), Expect = 2e-34
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 220 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVR 399
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 400 AIRKKMCEIVTRDVTSSELREVVNKLIPDSIAKDIE 507
IR +M +I+T +V+ ++L+++VNKL DSIAKDIE
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIE 96
>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
D.melanogaster alpha-spectrin mRNA, complete cds. ).
Length = 2415
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 292 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIVTRDVTSSELREVVN 471
+K + V + G T + Q K C Q T V I K C + D T REV
Sbjct: 932 LKKHEALVSDLEAFGNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSM 991
Query: 472 K 474
K
Sbjct: 992 K 992
>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p protein.
Length = 1557
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 292 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIVTRDVTSSELREVVN 471
+K + V + G T + Q K C Q T V I K C + D T REV
Sbjct: 932 LKKHEALVSDLEAFGNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSM 991
Query: 472 K 474
K
Sbjct: 992 K 992
>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
protein.
Length = 2415
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 292 VKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIVTRDVTSSELREVVN 471
+K + V + G T + Q K C Q T V I K C + D T REV
Sbjct: 932 LKKHEALVSDLEAFGNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSM 991
Query: 472 K 474
K
Sbjct: 992 K 992
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,335,707
Number of Sequences: 53049
Number of extensions: 532793
Number of successful extensions: 1430
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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