Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D13
(434 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 212 9e-56
03_01_0547 + 4093196-4093657,4094267-4095148 212 9e-56
03_01_0544 + 4082528-4082989,4083585-4084466 212 9e-56
03_01_0543 + 4076981-4077442,4078145-4079026 212 9e-56
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 128 2e-30
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 128 2e-30
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 85 2e-17
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 80 9e-16
02_04_0462 + 23131433-23132836 69 2e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 68 3e-12
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 52 2e-07
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 47 6e-06
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 46 1e-05
03_05_0511 + 25056018-25059107 44 7e-05
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 43 1e-04
02_04_0148 - 20198407-20201424 42 2e-04
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 42 2e-04
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 38 0.003
04_01_0103 + 1082077-1082167,1083037-1085477 38 0.005
02_04_0017 + 18937774-18937864,18938505-18940945 38 0.005
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 36 0.014
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 36 0.019
01_06_0662 + 30987187-30987277,30987825-30990214 33 0.10
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 30 0.71
02_02_0694 + 13013966-13014361 29 2.2
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 27 5.0
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 6.6
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 6.6
11_06_0412 - 23235670-23236512,23236804-23237838 27 8.7
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 27 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 212 bits (518), Expect = 9e-56
Identities = 99/109 (90%), Positives = 101/109 (92%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQA 109
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 212 bits (518), Expect = 9e-56
Identities = 99/109 (90%), Positives = 101/109 (92%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQA 109
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 212 bits (518), Expect = 9e-56
Identities = 99/109 (90%), Positives = 101/109 (92%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQA 109
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 212 bits (518), Expect = 9e-56
Identities = 99/109 (90%), Positives = 101/109 (92%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQA 109
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 128 bits (309), Expect = 2e-30
Identities = 54/102 (52%), Positives = 77/102 (75%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 306
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 307 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
ERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QA
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQA 349
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 128 bits (309), Expect = 2e-30
Identities = 54/102 (52%), Positives = 77/102 (75%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 306
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 307 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
ERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QA
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQA 349
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/97 (41%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +1
Query: 154 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 333
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 334 LWKFETGKYYVTIIDAP----GHRDFIKNMITGTSQA 432
FET TI+DAP GH+ ++ NMI+G SQA
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQA 100
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 79.8 bits (188), Expect = 9e-16
Identities = 31/61 (50%), Positives = 47/61 (77%)
Frame = +1
Query: 250 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 429
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 430 A 432
+
Sbjct: 336 S 336
>02_04_0462 + 23131433-23132836
Length = 467
Score = 68.9 bits (161), Expect = 2e-12
Identities = 39/109 (35%), Positives = 56/109 (51%)
Frame = +1
Query: 103 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 282
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 283 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 429
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQ 156
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 68.1 bits (159), Expect = 3e-12
Identities = 40/106 (37%), Positives = 54/106 (50%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEAGKAKAVAFDEIDK 107
Query: 292 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 429
E+ RGITI A ++ET K + +D PGH D++KNMITG +Q
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQ 153
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/90 (38%), Positives = 46/90 (51%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
NI + H+DSGK+T T ++Y G I E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+GITI A Y V IID PGH DF
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDF 149
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 47.2 bits (107), Expect = 6e-06
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +1
Query: 124 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 303
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 304 RERGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ERGITI K+ + IID PGH DF
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGHVDF 182
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 46.0 bits (104), Expect = 1e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
+G T+++ FET TI+DAPGH+ ++ NMI+G SQA
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQA 55
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 43.6 bits (98), Expect = 7e-05
Identities = 28/90 (31%), Positives = 41/90 (45%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N ++ HVD GK+T HL+ CG + G ++ +D L E+
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
R IT+ A G + V +ID+PGH DF
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDF 88
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 42.7 bits (96), Expect = 1e-04
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 310 RGITIDIAL----WKFETGKYYVTIIDAPGHRDF 399
RGITI + + Y + +ID PGH DF
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDF 156
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 310 RGITI---DIALWK--FETGKYYVTIIDAPGHRDF 399
R IT+ IAL + + G + V +ID+PGH DF
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDF 100
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N+ VI HVD GK+T L+ +CG + +D + ERE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
RGITI + + + ++D PGH DF
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADF 136
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 38.3 bits (85), Expect = 0.003
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 310 RGITIDI---------------ALWKFETGKYYVTIIDAPGHRDF 399
RGIT+ A + + Y + +ID PGH DF
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDF 147
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 37.5 bits (83), Expect = 0.005
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 273
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 274 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ + E ++ + + + +Y + +ID+PGH DF
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDF 111
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 37.5 bits (83), Expect = 0.005
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 273
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 274 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ + E ++ + + + +Y + +ID+PGH DF
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDF 111
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 35.9 bits (79), Expect = 0.014
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
NI ++ HVD GK+T ++ + + + + QE ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
RGITI + IID PGH DF
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSDF 195
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 35.5 bits (78), Expect = 0.019
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 297
N+ VI HVD GKST T L+ G I + + + A E +G + K + L
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGI--SLY 78
Query: 298 AERERGITIDIALWKFE----TGKYYVTIIDAPGHRDF 399
E D AL FE Y + +ID+PGH DF
Sbjct: 79 YE-----MTDAALRSFEGKRDGNSYLINLIDSPGHIDF 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 33.1 bits (72), Expect = 0.10
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 297
N+ V+ HVD GKST T L+ G I + + + + E +G + K + +
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKSTGISLYYE 80
Query: 298 AERERGITIDIALWKFETGKYYVTIIDAPGHRDF 399
E ++ + +Y + +ID+PGH DF
Sbjct: 81 MSDE---SLKSYKGDRDGNEYLINLIDSPGHVDF 111
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 30.3 bits (65), Expect = 0.71
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 310 AHARPLVCPIPKRT*RNPYPFPGLPSR 230
A ARP + P+P+R + +PFP P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>02_02_0694 + 13013966-13014361
Length = 131
Score = 28.7 bits (61), Expect = 2.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 366 HHHRRSWTQRFHQEHDHWN 422
HHH R H+ HD WN
Sbjct: 78 HHHHRHHGHHHHRGHDRWN 96
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/94 (21%), Positives = 40/94 (42%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N+ ++GH+ GK+ L+ + +D F+ E + + F V ++ +
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVD-----TFDSEGERHVR--FTDTRVDEQERRVSI 202
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNM 411
+ + + + L Y I+D PGH +F M
Sbjct: 203 KAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEM 236
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 118 KVHINIVVIGHVDSG 162
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 151 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 330
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 331 AL 336
+
Sbjct: 488 TI 489
>11_06_0412 - 23235670-23236512,23236804-23237838
Length = 625
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 205 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 327
+ K+T++ + A+EM KG + V DKL E ++ + D
Sbjct: 500 VSKKTLQDTVQCAREMLKGCNSFQSVYDKLMEEPQKALVPD 540
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +3
Query: 300 RA*AWYHHRYCSLEVRNRQI---LCHHHRRSWT-QRFHQEHDHW 419
R+ A +HH + + ++R HHH++ + HQ H HW
Sbjct: 39 RSAAHHHHHHANPRRQHRGGGGGAYHHHQQHYQPHHHHQHHQHW 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,582,056
Number of Sequences: 37544
Number of extensions: 232975
Number of successful extensions: 744
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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