Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D13
(434 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 232 1e-63
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 232 1e-63
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 112 2e-27
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 79 2e-17
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.48
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.64
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.0
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 6.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 7.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.9
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 232 bits (567), Expect = 1e-63
Identities = 107/109 (98%), Positives = 108/109 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQA 109
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 232 bits (567), Expect = 1e-63
Identities = 107/109 (98%), Positives = 108/109 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 109
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 112 bits (269), Expect = 2e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 277 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 52
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 79.4 bits (187), Expect = 2e-17
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 325 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 432
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 36
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.48
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKST 171
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 2.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 364 VTIIDAPGHRDFI 402
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.64
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 127 INIVVIGHVDSGKST 171
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 282 YPSVLEGTLTHFLG 241
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 7.9
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 223 RWYVCRYHRIC 191
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 7.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 191 TNAVVSTNVPSKSSRRKPRKWVRVPSSTLGYWTN 292
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,978
Number of Sequences: 438
Number of extensions: 2453
Number of successful extensions: 32
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -