Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D12
(315 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 1.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 1.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 6.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 6.2
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 6.2
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 6.2
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 6.2
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 6.2
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 20 6.2
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 6.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 6.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 6.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 6.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 6.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 6.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 6.2
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 6.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 6.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 20 6.2
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 8.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 8.1
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 20 8.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 20 8.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 8.1
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 20 8.1
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 1.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 190 EWFQFFHSKTGVTGPYTFGVGLTTYLFSKEIYVMEH 297
EW S + T FG+G TT L S I + H
Sbjct: 207 EWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRH 242
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 1.2
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +3
Query: 219 WCNWSLHIWRRPHDVPIQQGD 281
+C W L+ PH + GD
Sbjct: 11 YCTWELNATNSPHTCRTKNGD 31
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = -2
Query: 215 FEWKNWNHSSGMNPSLTLPRF 153
++W +S G++ ++LP+F
Sbjct: 168 YKWNEGPNSVGVSNEVSLPQF 188
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 109
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 310 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 342
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 RTQHLLPEAPPQMLLVYVMRQNFP-RPVRLTEPW 161
R ++P + + V V NFP RP+ + PW
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPI-MVRPW 358
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = -2
Query: 215 FEWKNWNHSSGMNPSLTLPRF 153
++W +S G++ ++LP+F
Sbjct: 107 YKWNEGPNSVGVSNEVSLPQF 127
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 200 WNHSSGMNPSLTLPRFSEPDWSWEVLS 120
WNH+ T + P+W+ VL+
Sbjct: 15 WNHTVSSGERDTRTEYYLPNWTDLVLA 41
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 8.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 235 RDQLHQSLSGRTGTIL 188
R LH++L GRT ++
Sbjct: 1146 RAALHEALRGRTAQLI 1161
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 19.8 bits (39), Expect = 8.1
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -2
Query: 146 PDWSW 132
PDWSW
Sbjct: 112 PDWSW 116
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +3
Query: 66 TQHLLPEAPPQMLLVYVMRQNFPRPV 143
T+ LP PP+ + PRP+
Sbjct: 633 TEERLPPLPPKRIRKMPSMPLLPRPI 658
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 8.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 53 QQSPYTALIARSSTTDVAGV 112
QQ+PY L +T +AGV
Sbjct: 824 QQNPYMFLPVSYMSTTMAGV 843
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 19.8 bits (39), Expect = 8.1
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -2
Query: 146 PDWSW 132
PDWSW
Sbjct: 112 PDWSW 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,054
Number of Sequences: 438
Number of extensions: 1858
Number of successful extensions: 27
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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