Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D11
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   214   1e-57
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.17 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        28   0.17 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   4.8  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   6.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  214 bits (522), Expect = 1e-57
 Identities = 99/125 (79%), Positives = 111/125 (88%)
 Frame = +2

Query: 65  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 244
           +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80

Query: 245 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTSDGYVLRV 424
           ERSFRKF+L+AE V  R+VL NFHGM LTTDKLR MV KWQTLIE ++DVKT+DG++LRV
Sbjct: 81  ERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRV 140

Query: 425 FCIGF 439
           FCIGF
Sbjct: 141 FCIGF 145


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.17
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 209 VSLADLQADSDAERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQT 370
           V+LA+L A SD             D+Q + V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 0.17
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 209 VSLADLQADSDAERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQT 370
           V+LA+L A SD             D+Q + V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 123  PRDKWAPPLSIAPRE 167
            P D W PP    P+E
Sbjct: 1746 PHDNWLPPCYYVPKE 1760


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 263 TCGKTFPHHYQPGDQQGRPQKHAPLDP 183
           T G+T+ HHY P   +   Q  A  +P
Sbjct: 32  TMGETWLHHYTPESNRQSAQWTATGEP 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,606
Number of Sequences: 2352
Number of extensions: 9704
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)