Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D11
         (441 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   220   6e-58
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   220   6e-58
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   220   6e-58
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   210   5e-55
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   149   1e-36
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...    72   4e-13
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    28   6.5  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    28   6.5  

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  220 bits (538), Expect = 6e-58
 Identities = 102/125 (81%), Positives = 112/125 (89%)
 Frame = +2

Query: 65  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 244
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 245 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTSDGYVLRV 424
           ERSFRKFRLIAEDVQ+RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140

Query: 425 FCIGF 439
           FCIGF
Sbjct: 141 FCIGF 145


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  220 bits (538), Expect = 6e-58
 Identities = 102/125 (81%), Positives = 112/125 (89%)
 Frame = +2

Query: 65  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 244
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 245 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTSDGYVLRV 424
           ERSFRKFRLIAEDVQ+RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140

Query: 425 FCIGF 439
           FCIGF
Sbjct: 141 FCIGF 145


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  220 bits (538), Expect = 6e-58
 Identities = 102/125 (81%), Positives = 112/125 (89%)
 Frame = +2

Query: 65  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 244
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 245 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTSDGYVLRV 424
           ERSFRKFRLIAEDVQ+RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140

Query: 425 FCIGF 439
           FCIGF
Sbjct: 141 FCIGF 145


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  210 bits (514), Expect = 5e-55
 Identities = 99/126 (78%), Positives = 109/126 (86%), Gaps = 1/126 (0%)
 Frame = +2

Query: 65  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADSD 241
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+  KGRVFEVSL  DLQ D D
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80

Query: 242 AERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTSDGYVLR 421
            E SFRKFRLIAEDVQ+RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LR
Sbjct: 81  PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 140

Query: 422 VFCIGF 439
           VFCIGF
Sbjct: 141 VFCIGF 146


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  149 bits (362), Expect = 1e-36
 Identities = 70/82 (85%), Positives = 74/82 (90%)
 Frame = +2

Query: 194 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQERNVLCNFHGMDLTTDKLRWMVKKWQTL 373
           GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ+RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14  GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73

Query: 374 IEANIDVKTSDGYVLRVFCIGF 439
           IEA ++ KT DGY+LRVFCIGF
Sbjct: 74  IEAIVEAKTVDGYLLRVFCIGF 95


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = +2

Query: 320 MDLTTDKLRWMVKKWQTLIEANIDVKTSDGYVLRVFCIGF 439
           MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGF
Sbjct: 1   MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGF 40


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
            transmembrane protein protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 195  PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 97
            PFRP +  +FVPW R+  + P  + ++ D   TS
Sbjct: 963  PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
            protein.
          Length = 3004

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 195  PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 97
            PFRP +  +FVPW R+  + P  + ++ D   TS
Sbjct: 963  PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,155,687
Number of Sequences: 53049
Number of extensions: 446362
Number of successful extensions: 1120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)