Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D10
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 33 0.16
AK124784-1|BAC85948.1| 218|Homo sapiens protein ( Homo sapiens ... 33 0.28
D82060-1|BAA11528.1| 429|Homo sapiens membrane protein with his... 32 0.49
BC000645-1|AAH00645.1| 469|Homo sapiens solute carrier family 3... 32 0.49
AL844527-11|CAI41839.1| 469|Homo sapiens solute carrier family ... 32 0.49
AL662824-23|CAI17615.1| 469|Homo sapiens solute carrier family ... 32 0.49
AL645940-9|CAI18067.1| 469|Homo sapiens solute carrier family 3... 32 0.49
AL031228-11|CAA20238.1| 469|Homo sapiens solute carrier family ... 32 0.49
AF117221-1|AAD12305.1| 429|Homo sapiens KE4 protein protein. 32 0.49
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 31 0.65
BC129989-1|AAI29990.1| 120|Homo sapiens NUFIP2 protein protein. 31 0.65
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 31 0.65
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 31 0.65
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 31 0.65
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 31 0.65
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 30 2.0
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 30 2.0
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 30 2.0
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 29 4.6
U25435-1|AAB07788.1| 727|Homo sapiens CTCF protein. 28 8.0
BT009915-1|AAP88917.1| 727|Homo sapiens CCCTC-binding factor (z... 28 8.0
BC014267-1|AAH14267.1| 727|Homo sapiens CCCTC-binding factor (z... 28 8.0
AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens ... 28 8.0
AF145477-1|AAF31318.1| 727|Homo sapiens transcriptional repress... 28 8.0
AB209793-1|BAD93030.1| 443|Homo sapiens CCCTC-binding factor (z... 28 8.0
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 33.5 bits (73), Expect = 0.16
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -3
Query: 211 NCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYHH 98
+C H+ +H+++ R + + H HH H+H +H+
Sbjct: 124 SCHSHHHSHHRSHHRSHHCSHHHSHHHSGHHSHHNFHN 161
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 238 WCNYHDQKRNC-RYHNDCYHQNYSRDRY*N*SHGHHQIHRHAH 113
WC+ H + R H+ +H ++ + + H HH H H++
Sbjct: 122 WCSCHSHHHSHHRSHHRSHHCSHHHSHHHSGHHSHHNFHNHSN 164
>AK124784-1|BAC85948.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ42794 fis, clone BRAWH3007783. ).
Length = 218
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = -3
Query: 250 HLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGH--HQIHRHAHLGYHHVRLRNL 80
H H H Q C +H + Q R +HGH +H + H HH N+
Sbjct: 137 HHRHTTQAHTQAHTCTHHTGTHRQTQLHTRSHTDTHGHTYMYLHIYTHAHKHHSTCTNM 195
>D82060-1|BAA11528.1| 429|Homo sapiens membrane protein with
histidine rich charge clusters protein.
Length = 429
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>BC000645-1|AAH00645.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>AL844527-11|CAI41839.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>AL662824-23|CAI17615.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>AL645940-9|CAI18067.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>AL031228-11|CAA20238.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>AF117221-1|AAD12305.1| 429|Homo sapiens KE4 protein protein.
Length = 429
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 295 GYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHA 116
G HD L+ +E + H H + H+ + H+ + ++ + + H H H H+
Sbjct: 29 GGHDDLHDDLQE-DFHGHSHRHSHEDFHHG--HSHAHGHGHTHESIWH-GHTHDHDHGHS 84
Query: 115 HLGYHHVRLRNLLHILLYDRYCGH 44
H HH H LY R GH
Sbjct: 85 HEDLHHGHSHGYSHESLYHRGHGH 108
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -3
Query: 319 HSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYH---QNYSRDRY*N* 149
HS HG+ + ++I H + HD + H D +H YS + +
Sbjct: 49 HSHEDFHHGHSHAHGHGHTHESIW-HGHTHDHDHGHS---HEDLHHGHSHGYSHESLYHR 104
Query: 148 SHGHHQIHRHAHLGY 104
HGH H H+H GY
Sbjct: 105 GHGHD--HEHSHGGY 117
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 259 QNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRH 119
Q+ H HH ++H Q++ + H +H +Y + N SH HH H H
Sbjct: 11 QHHHSHHHPHHHPQQQQQQPH---HHHHY---YFYNHSHNHHHHHHH 51
>BC129989-1|AAI29990.1| 120|Homo sapiens NUFIP2 protein protein.
Length = 120
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 259 QNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRH 119
Q+ H HH ++H Q++ + H +H +Y + N SH HH H H
Sbjct: 11 QHHHSHHHPHHHPQQQQQQPH---HHHHY---YFYNHSHNHHHHHHH 51
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 259 QNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRH 119
Q+ H HH ++H Q++ + H +H +Y + N SH HH H H
Sbjct: 11 QHHHSHHHPHHHPQQQQQQPH---HHHHY---YFYNHSHNHHHHHHH 51
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 259 QNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRH 119
Q+ H HH ++H Q++ + H +H +Y + N SH HH H H
Sbjct: 11 QHHHSHHHPHHHPQQQQQQPH---HHHHY---YFYNHSHNHHHHHHH 51
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 259 QNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRH 119
Q+ H HH ++H Q++ + H +H +Y + N SH HH H H
Sbjct: 11 QHHHSHHHPHHHPQQQQQQPH---HHHHY---YFYNHSHNHHHHHHH 51
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 259 QNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRH 119
Q+ H HH ++H Q++ + H +H +Y + N SH HH H H
Sbjct: 30 QHHHSHHHPHHHPQQQQQQPH---HHHHY---YFYNHSHNHHHHHHH 70
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -3
Query: 250 HLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH 101
H HH H + H+ H + + + + HGHH H H G+H
Sbjct: 352 HKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPH-GHH 400
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -3
Query: 328 HSDHSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N* 149
HS ++ S LH + + EQ+ H HH +H + + + H + + +
Sbjct: 340 HSHNNNSSDLHPHKHHSH----EQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHH 395
Query: 148 SHGHHQIHRHAH 113
HGHH H H
Sbjct: 396 PHGHHPHGHHPH 407
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 241 HWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH 101
H +H +++ H+ H + D + HGHH H H G+H
Sbjct: 350 HPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPH-GHH 395
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -3
Query: 250 HLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH 101
H HH H + H+ H + + + + HGHH H H G+H
Sbjct: 352 HKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPH-GHH 400
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -3
Query: 328 HSDHSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N* 149
HS ++ S LH + + EQ+ H HH +H + + + H + + +
Sbjct: 340 HSHNNNSSDLHPHKHHSH----EQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHH 395
Query: 148 SHGHHQIHRHAH 113
HGHH H H
Sbjct: 396 PHGHHPHGHHPH 407
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 241 HWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH 101
H +H +++ H+ H + D + HGHH H H G+H
Sbjct: 350 HPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPH-GHH 395
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -3
Query: 250 HLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH 101
H HH H + H+ H + + + + HGHH H H G+H
Sbjct: 352 HKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPH-GHH 400
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -3
Query: 328 HSDHSFPSLLHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N* 149
HS ++ S LH + + EQ+ H HH +H + + + H + + +
Sbjct: 340 HSHNNNSSDLHPHKHHSH----EQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHH 395
Query: 148 SHGHHQIHRHAH 113
HGHH H H
Sbjct: 396 PHGHHPHGHHPH 407
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 241 HWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH 101
H +H +++ H+ H + D + HGHH H H G+H
Sbjct: 350 HPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPH-GHH 395
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = -3
Query: 250 HLH-HWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHRHAHLGYH-HVRLRNLL 77
H+H H C + H Y + Y + H + H HAH+ H H+ +
Sbjct: 70 HIHTHICTHAHTLTYTHIHTCTYKRTYIQGHIHTHMHTYTHAHTHAHIHIHVHIHMNIHT 129
Query: 76 HILLYDRYC 50
H + C
Sbjct: 130 HTCTHIYTC 138
>U25435-1|AAB07788.1| 727|Homo sapiens CTCF protein.
Length = 727
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 286 DRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYS 170
D + + +HL +Y +Q + CRY + +H+ Y+
Sbjct: 443 DTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYA 481
>BT009915-1|AAP88917.1| 727|Homo sapiens CCCTC-binding factor (zinc
finger protein) protein.
Length = 727
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 286 DRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYS 170
D + + +HL +Y +Q + CRY + +H+ Y+
Sbjct: 443 DTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYA 481
>BC014267-1|AAH14267.1| 727|Homo sapiens CCCTC-binding factor (zinc
finger protein) protein.
Length = 727
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 286 DRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYS 170
D + + +HL +Y +Q + CRY + +H+ Y+
Sbjct: 443 DTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYA 481
>AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ32873 fis, clone TESTI2003998, weakly similar to
T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 170
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/65 (23%), Positives = 25/65 (38%)
Frame = -3
Query: 301 LHGYHDRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYSRDRY*N*SHGHHQIHR 122
+H Y C++ N+H H + ++ D + H Y+ +H H H
Sbjct: 56 VHIYAHMQICTHANANMHAHMYTHHTDTDMHSHTHAHTQTWTYTCTH----THTHAVTHV 111
Query: 121 HAHLG 107
H H G
Sbjct: 112 HMHAG 116
>AF145477-1|AAF31318.1| 727|Homo sapiens transcriptional repressor
CTCF protein.
Length = 727
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 286 DRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYS 170
D + + +HL +Y +Q + CRY + +H+ Y+
Sbjct: 443 DTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYA 481
>AB209793-1|BAD93030.1| 443|Homo sapiens CCCTC-binding factor (zinc
finger protein) variant protein.
Length = 443
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 286 DRLYCSYREQNIHLHHWCNYHDQKRNCRYHNDCYHQNYS 170
D + + +HL +Y +Q + CRY + +H+ Y+
Sbjct: 159 DTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYA 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,141,247
Number of Sequences: 237096
Number of extensions: 544848
Number of successful extensions: 1475
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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