Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D09
         (166 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   0.22 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   1.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    19   3.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    19   3.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    19   3.6  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 0.22
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 27  ITNTHFPLQAHIIVSSDHSAAITYIIVK 110
           +TNT  P Q  +++SS H      +IVK
Sbjct: 126 LTNTCSPPQGQLVLSSMHKYQPRILIVK 153


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 2    HEGSGFGLNNKYPLSFTSSYHREQ 73
            +E +GF     +P+ +TS++  E+
Sbjct: 966  NERAGFTAAGFFPIDYTSAFSSEK 989


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 29  NKYPLSFTSSYH 64
           NKY L   S YH
Sbjct: 134 NKYQLEVDSGYH 145


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 29  NKYPLSFTSSYH 64
           NKY L   S YH
Sbjct: 134 NKYQLEVDSGYH 145


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 29  NKYPLSFTSSYH 64
           NKY L   S YH
Sbjct: 134 NKYQLEVDSGYH 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,826
Number of Sequences: 336
Number of extensions: 439
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 34
effective length of database: 111,161
effective search space used:  2223220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)