Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D06
         (226 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   3.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   4.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   4.1  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    21   5.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    20   9.4  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 29  RCAPVLSSIATDAPAT 76
           RCA  +SS AT  PAT
Sbjct: 949 RCASYVSSNATVVPAT 964


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = -3

Query: 218  NEKRKRDQDDHQ*LCSASGTHCCRCTQCRA*VAPSRN 108
            + K    Q   Q     SGT C   T   A  APS +
Sbjct: 1284 DRKSNHQQQQQQQQVPGSGTECSASTSEPAPAAPSNS 1320


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 149 DNNVFRLHYK 178
           D +VF+LHYK
Sbjct: 967 DGDVFKLHYK 976


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 220 VTRSENAIKMITSSFVVQAEHIVVDAHSVEL 128
           V R+E A +       + A+  VV AH+VEL
Sbjct: 225 VARAEEAKRCEEDLRALGADTCVVAAHAVEL 255


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 158  HCCRCTQCR 132
            +C +CT+CR
Sbjct: 1392 NCVKCTRCR 1400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,408
Number of Sequences: 2352
Number of extensions: 2318
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used: 10212621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)