Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D06
         (226 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    28   6.2  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             28   6.2  

>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 150  SMHTVSSLSSPFTEPNTSNMAVR*PVAGASVAIEEST 40
            SM T++ +S+P T   +++MA+  P  G S A  + T
Sbjct: 9348 SMETITRISTPLTRKESTDMAIT-PKTGPSGATSQGT 9383


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 150  SMHTVSSLSSPFTEPNTSNMAVR*PVAGASVAIEEST 40
            SM T++ +S+P T   +++MA+  P  G S A  + T
Sbjct: 1052 SMETITRISTPLTRKESTDMAIT-PKTGPSGATSQGT 1087


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,481,250
Number of Sequences: 237096
Number of extensions: 288565
Number of successful extensions: 730
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 76,859,062
effective HSP length: 53
effective length of database: 64,292,974
effective search space used: 1350152454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)