Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D06
(226 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060368-1|AAL25407.1| 367|Drosophila melanogaster LD22570p pro... 66 8e-12
AF172257-1|AAF87943.1| 367|Drosophila melanogaster innexin 2 pr... 66 8e-12
AF137269-1|AAD50378.1| 367|Drosophila melanogaster gap junction... 66 8e-12
AE014298-988|AAN09193.1| 367|Drosophila melanogaster CG4590-PB,... 66 8e-12
AE014298-987|AAF46229.1| 367|Drosophila melanogaster CG4590-PA,... 66 8e-12
X65103-1|CAA46228.1| 122|Drosophila melanogaster shaking-B neur... 34 0.023
U17330-1|AAC46584.1| 372|Drosophila melanogaster passover-vital... 34 0.023
S78495-1|AAB34769.1| 372|Drosophila melanogaster Shak-B (lethal... 34 0.023
M98872-1|AAA89079.1| 122|Drosophila melanogaster shaking-B prot... 34 0.023
AE014298-3051|AAN09537.1| 122|Drosophila melanogaster CG32508-P... 34 0.023
AE014298-3050|AAF50883.1| 372|Drosophila melanogaster CG32508-P... 34 0.023
AF137270-1|AAD50379.1| 438|Drosophila melanogaster gap junction... 33 0.071
AE014298-986|AAF46228.1| 438|Drosophila melanogaster CG2977-PA,... 33 0.071
AY058643-1|AAL13872.1| 395|Drosophila melanogaster LD34202p pro... 31 0.16
AF172258-1|AAF87944.1| 395|Drosophila melanogaster innexin 3 pr... 31 0.16
AE014297-4277|AAF56822.1| 395|Drosophila melanogaster CG1448-PA... 31 0.16
X56799-1|CAA40135.1| 1365|Drosophila melanogaster supressor two ... 26 8.2
AE013599-1626|AAF58433.1| 1368|Drosophila melanogaster CG3905-PA... 26 8.2
>AY060368-1|AAL25407.1| 367|Drosophila melanogaster LD22570p
protein.
Length = 367
Score = 65.7 bits (153), Expect = 8e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
MFDVFGSVKGLLK+D VCIDNNVFR+HYKAT
Sbjct: 1 MFDVFGSVKGLLKIDQVCIDNNVFRMHYKAT 31
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 177 KLLVIILIAFSLLVTS 224
K VIILIAFSLLVTS
Sbjct: 29 KATVIILIAFSLLVTS 44
>AF172257-1|AAF87943.1| 367|Drosophila melanogaster innexin 2
protein.
Length = 367
Score = 65.7 bits (153), Expect = 8e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
MFDVFGSVKGLLK+D VCIDNNVFR+HYKAT
Sbjct: 1 MFDVFGSVKGLLKIDQVCIDNNVFRMHYKAT 31
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 177 KLLVIILIAFSLLVTS 224
K VIILIAFSLLVTS
Sbjct: 29 KATVIILIAFSLLVTS 44
>AF137269-1|AAD50378.1| 367|Drosophila melanogaster gap junction
protein prp33 protein.
Length = 367
Score = 65.7 bits (153), Expect = 8e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
MFDVFGSVKGLLK+D VCIDNNVFR+HYKAT
Sbjct: 1 MFDVFGSVKGLLKIDQVCIDNNVFRMHYKAT 31
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 177 KLLVIILIAFSLLVTS 224
K VIILIAFSLLVTS
Sbjct: 29 KATVIILIAFSLLVTS 44
>AE014298-988|AAN09193.1| 367|Drosophila melanogaster CG4590-PB,
isoform B protein.
Length = 367
Score = 65.7 bits (153), Expect = 8e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
MFDVFGSVKGLLK+D VCIDNNVFR+HYKAT
Sbjct: 1 MFDVFGSVKGLLKIDQVCIDNNVFRMHYKAT 31
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 177 KLLVIILIAFSLLVTS 224
K VIILIAFSLLVTS
Sbjct: 29 KATVIILIAFSLLVTS 44
>AE014298-987|AAF46229.1| 367|Drosophila melanogaster CG4590-PA,
isoform A protein.
Length = 367
Score = 65.7 bits (153), Expect = 8e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
MFDVFGSVKGLLK+D VCIDNNVFR+HYKAT
Sbjct: 1 MFDVFGSVKGLLKIDQVCIDNNVFRMHYKAT 31
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 177 KLLVIILIAFSLLVTS 224
K VIILIAFSLLVTS
Sbjct: 29 KATVIILIAFSLLVTS 44
>X65103-1|CAA46228.1| 122|Drosophila melanogaster shaking-B neural
protein protein.
Length = 122
Score = 34.3 bits (75), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
M D+F +K L+K+ V D+ VFRLHY T
Sbjct: 1 MLDIFRGLKNLVKVSHVKTDSIVFRLHYSIT 31
>U17330-1|AAC46584.1| 372|Drosophila melanogaster passover-vital
protein protein.
Length = 372
Score = 34.3 bits (75), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
M D+F +K L+K+ V D+ VFRLHY T
Sbjct: 1 MLDIFRGLKNLVKVSHVKTDSIVFRLHYSIT 31
>S78495-1|AAB34769.1| 372|Drosophila melanogaster Shak-B (lethal)
protein protein.
Length = 372
Score = 34.3 bits (75), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
M D+F +K L+K+ V D+ VFRLHY T
Sbjct: 1 MLDIFRGLKNLVKVSHVKTDSIVFRLHYSIT 31
>M98872-1|AAA89079.1| 122|Drosophila melanogaster shaking-B
protein.
Length = 122
Score = 34.3 bits (75), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
M D+F +K L+K+ V D+ VFRLHY T
Sbjct: 1 MLDIFRGLKNLVKVSHVKTDSIVFRLHYSIT 31
>AE014298-3051|AAN09537.1| 122|Drosophila melanogaster CG32508-PB,
isoform B protein.
Length = 122
Score = 34.3 bits (75), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
M D+F +K L+K+ V D+ VFRLHY T
Sbjct: 1 MLDIFRGLKNLVKVSHVKTDSIVFRLHYSIT 31
>AE014298-3050|AAF50883.1| 372|Drosophila melanogaster CG32508-PA,
isoform A protein.
Length = 372
Score = 34.3 bits (75), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKAT 184
M D+F +K L+K+ V D+ VFRLHY T
Sbjct: 1 MLDIFRGLKNLVKVSHVKTDSIVFRLHYSIT 31
>AF137270-1|AAD50379.1| 438|Drosophila melanogaster gap junction
protein prp7 protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDT--VCIDNNVFRLHYKAT 184
M + F SV+ LK D V IDN VF+LHY+ T
Sbjct: 1 MLNTFSSVRQYLKFDLTRVVIDNIVFKLHYRWT 33
>AE014298-986|AAF46228.1| 438|Drosophila melanogaster CG2977-PA,
isoform A protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 92 MFDVFGSVKGLLKLDT--VCIDNNVFRLHYKAT 184
M + F SV+ LK D V IDN VF+LHY+ T
Sbjct: 1 MLNTFSSVRQYLKFDLTRVVIDNIVFKLHYRWT 33
>AY058643-1|AAL13872.1| 395|Drosophila melanogaster LD34202p
protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 89 AMFDVFGSVKGLLK----LDTVCIDNNVFRLHYKAT 184
A+F + +V G +K LD IDN VFR HY+ T
Sbjct: 2 AVFGMVSAVSGFIKIRYLLDKAVIDNMVFRCHYRIT 37
>AF172258-1|AAF87944.1| 395|Drosophila melanogaster innexin 3
protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 89 AMFDVFGSVKGLLK----LDTVCIDNNVFRLHYKAT 184
A+F + +V G +K LD IDN VFR HY+ T
Sbjct: 2 AVFGMVSAVSGFIKIRYLLDKAVIDNMVFRCHYRIT 37
>AE014297-4277|AAF56822.1| 395|Drosophila melanogaster CG1448-PA
protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 89 AMFDVFGSVKGLLK----LDTVCIDNNVFRLHYKAT 184
A+F + +V G +K LD IDN VFR HY+ T
Sbjct: 2 AVFGMVSAVSGFIKIRYLLDKAVIDNMVFRCHYRIT 37
>X56799-1|CAA40135.1| 1365|Drosophila melanogaster supressor two of
zeste protein.
Length = 1365
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 195 R*SPVAL*CKRNTLLSMHTVSSLSSPFTEPNT 100
R SP AL RNT H+ S SSP E N+
Sbjct: 952 RTSPPALINLRNTAAPQHSFPSKSSPKVEANS 983
>AE013599-1626|AAF58433.1| 1368|Drosophila melanogaster CG3905-PA
protein.
Length = 1368
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 195 R*SPVAL*CKRNTLLSMHTVSSLSSPFTEPNT 100
R SP AL RNT H+ S SSP E N+
Sbjct: 953 RTSPPALINLRNTAAPQHSFPSKSSPKVEANS 984
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,068,645
Number of Sequences: 53049
Number of extensions: 99712
Number of successful extensions: 265
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 24,988,368
effective HSP length: 54
effective length of database: 22,123,722
effective search space used: 442474440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -