BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D05
(352 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 4.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 5.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 5.6
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 20 7.4
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 20 7.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 20 7.4
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 20 9.8
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 20 9.8
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 20 9.8
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 20 9.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 9.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 9.8
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.0 bits (42), Expect = 4.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 150 PSRHFRSGLR 121
P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 148 QQAFPIWTPA 119
+QAFP W P+
Sbjct: 237 RQAFPFWLPS 246
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 148 QQAFPIWTPA 119
+QAFP W P+
Sbjct: 237 RQAFPFWLPS 246
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 7.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 286 KTARGTSLPAPVSLKNVLKESSPPP 212
KT R P+S+ N L+ S P P
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVP 403
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 44 NLFYLPLSSKN 76
NL+Y PLSS++
Sbjct: 265 NLYYSPLSSRS 275
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 7.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 286 KTARGTSLPAPVSLKNVLKESSPPP 212
KT R P+S+ N L+ S P P
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVP 403
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 195 PTDKTIGGG 221
PT+ TIGGG
Sbjct: 279 PTEVTIGGG 287
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 195 PTDKTIGGG 221
PT+ TIGGG
Sbjct: 279 PTEVTIGGG 287
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 130 RSEMPAGSC 156
RSE+P GSC
Sbjct: 93 RSELPWGSC 101
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 195 PTDKTIGGG 221
PT+ TIGGG
Sbjct: 279 PTEVTIGGG 287
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 327 QCGPRQLQWVQDRRRRHG 274
Q GP + W +D R+ G
Sbjct: 359 QAGPHFITWYKDGRQLPG 376
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.8 bits (39), Expect = 9.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 327 QCGPRQLQWVQDRRRRHG 274
Q GP + W +D R+ G
Sbjct: 359 QAGPHFITWYKDGRQLPG 376
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,559
Number of Sequences: 438
Number of extensions: 2606
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8060325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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