Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D04
(341 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97876-4|CAI20076.1| 105|Homo sapiens brain protein 44 protein. 101 8e-22
Z97876-3|CAI20075.1| 127|Homo sapiens brain protein 44 protein. 101 8e-22
CR533473-1|CAG38504.1| 127|Homo sapiens DKFZP564B167 protein. 101 8e-22
CR407632-1|CAG28560.1| 127|Homo sapiens DKFZP564B167 protein. 101 8e-22
BC104158-1|AAI04159.1| 127|Homo sapiens brain protein 44 protein. 101 8e-22
BC104157-1|AAI04158.1| 127|Homo sapiens brain protein 44 protein. 101 8e-22
AL035304-1|CAA22909.1| 127|Homo sapiens hypothetical protein pr... 101 8e-22
BC000810-1|AAH00810.1| 109|Homo sapiens brain protein 44-like p... 33 0.23
AL022069-3|CAI19654.1| 109|Homo sapiens brain protein 44-like p... 33 0.23
AF151887-1|AAD34124.1| 109|Homo sapiens CGI-129 protein protein. 33 0.23
CR456348-1|CAG30234.1| 134|Homo sapiens Em:AC005003.4 protein. 30 2.2
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 28 6.6
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 28 6.6
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 28 6.6
>Z97876-4|CAI20076.1| 105|Homo sapiens brain protein 44 protein.
Length = 105
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>Z97876-3|CAI20075.1| 127|Homo sapiens brain protein 44 protein.
Length = 127
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>CR533473-1|CAG38504.1| 127|Homo sapiens DKFZP564B167 protein.
Length = 127
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>CR407632-1|CAG28560.1| 127|Homo sapiens DKFZP564B167 protein.
Length = 127
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>BC104158-1|AAI04159.1| 127|Homo sapiens brain protein 44 protein.
Length = 127
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>BC104157-1|AAI04158.1| 127|Homo sapiens brain protein 44 protein.
Length = 127
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>AL035304-1|CAA22909.1| 127|Homo sapiens hypothetical protein
protein.
Length = 127
Score = 101 bits (241), Expect = 8e-22
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +3
Query: 117 YRALITSTDKFVPSRIRPLWEHEAGPKTIFFWAPAFKWGLVIGGVGDLNRPVESLSIPQS 296
Y L+ + +P ++RPL+ H AGP+T+FFWAP KWGLV G+ D+ RP E LS QS
Sbjct: 13 YHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQS 72
Query: 297 ASLAATGLIWSRYSL 341
A L ATG IWSRYSL
Sbjct: 73 AVLMATGFIWSRYSL 87
>BC000810-1|AAH00810.1| 109|Homo sapiens brain protein 44-like
protein.
Length = 109
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 207 FWAPAFKWGLVIGGVGDLNRPVESLSIPQSASLAATGLIWSRYS 338
FW P WGL I + D+ + E +S + +L L + R++
Sbjct: 27 FWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFA 70
>AL022069-3|CAI19654.1| 109|Homo sapiens brain protein 44-like
protein.
Length = 109
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 207 FWAPAFKWGLVIGGVGDLNRPVESLSIPQSASLAATGLIWSRYS 338
FW P WGL I + D+ + E +S + +L L + R++
Sbjct: 27 FWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFA 70
>AF151887-1|AAD34124.1| 109|Homo sapiens CGI-129 protein protein.
Length = 109
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 207 FWAPAFKWGLVIGGVGDLNRPVESLSIPQSASLAATGLIWSRYS 338
FW P WGL I + D+ + E +S + +L L + R++
Sbjct: 27 FWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFA 70
>CR456348-1|CAG30234.1| 134|Homo sapiens Em:AC005003.4 protein.
Length = 134
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 243 GGVGDLNRPVESLSIPQSASLAATGLIW 326
GGVGD RP+++ SIP + S ++W
Sbjct: 107 GGVGDTLRPLQARSIPSARSPVRRRVLW 134
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 55 IKIVNPEDPSNSLIIRKCRKSIEPLLHRLTNLFHQEFVRYGSMKQVQKQY 204
I+I P+DPSN + I ++ IE H + + ++ R +V+K +
Sbjct: 184 IQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAF 233
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 55 IKIVNPEDPSNSLIIRKCRKSIEPLLHRLTNLFHQEFVRYGSMKQVQKQY 204
I+I P+DPSN + I ++ IE H + + ++ R +V+K +
Sbjct: 184 IQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAF 233
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 55 IKIVNPEDPSNSLIIRKCRKSIEPLLHRLTNLFHQEFVRYGSMKQVQKQY 204
I+I P+DPSN + I ++ IE H + + ++ R +V+K +
Sbjct: 184 IQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAF 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,536,789
Number of Sequences: 237096
Number of extensions: 1097204
Number of successful extensions: 2140
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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