Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D03
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061127-1|AAL28675.1|  509|Drosophila melanogaster LD11031p pro...    45   4e-05
AE013599-3956|AAF47272.2|  509|Drosophila melanogaster CG3589-PA...    45   4e-05
AY122191-1|AAM52703.1|  479|Drosophila melanogaster LD44262p pro...    33   0.17 
AE013599-2548|AAF57802.1|  479|Drosophila melanogaster CG6401-PA...    33   0.17 

>AY061127-1|AAL28675.1|  509|Drosophila melanogaster LD11031p
           protein.
          Length = 509

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
 Frame = +1

Query: 52  PVGKGDSILAAGYPYFSEMNLP-DLRPTVTSGHINNVSPSLIQASCCVQSGFSGGPILRI 228
           P   G  +  AG+PY+   +   D  P++  G +       I +   VQ+G SGGP+   
Sbjct: 379 PATVGQMVYNAGFPYYVNFSFRHDFNPSIFQGRVIKCDTGAIMSDGSVQAGQSGGPMF-- 436

Query: 229 TXXXXXXXXXXXXXNAKTQLGAYYPYVNMSIPVRVFKQVLHQFILDKDITRLRVIDNDKD 408
                         N K      YP +N +IP+   +  L QF    D+  L  +    D
Sbjct: 437 --DQNGCILGVCVSNIKLD-DVVYPNINTAIPICDIRNTLQQFARTNDLNVLSNLVASPD 493

Query: 409 IIQAQWNL 432
           + +  W+L
Sbjct: 494 VHRV-WSL 500


>AE013599-3956|AAF47272.2|  509|Drosophila melanogaster CG3589-PA
           protein.
          Length = 509

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
 Frame = +1

Query: 52  PVGKGDSILAAGYPYFSEMNLP-DLRPTVTSGHINNVSPSLIQASCCVQSGFSGGPILRI 228
           P   G  +  AG+PY+   +   D  P++  G +       I +   VQ+G SGGP+   
Sbjct: 379 PATVGQMVYNAGFPYYVNFSFRHDFNPSIFQGRVIKCDTGAIMSDGSVQAGQSGGPMF-- 436

Query: 229 TXXXXXXXXXXXXXNAKTQLGAYYPYVNMSIPVRVFKQVLHQFILDKDITRLRVIDNDKD 408
                         N K      YP +N +IP+   +  L QF    D+  L  +    D
Sbjct: 437 --DQNGCILGVCVSNIKLD-DVVYPNINTAIPICDIRNTLQQFARTNDLNVLSNLVASPD 493

Query: 409 IIQAQWNL 432
           + +  W+L
Sbjct: 494 VHRV-WSL 500


>AY122191-1|AAM52703.1|  479|Drosophila melanogaster LD44262p
           protein.
          Length = 479

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 427 STEPVLCPYRCLSHVVSLY 371
           STEPV+CPYRC   V +LY
Sbjct: 389 STEPVMCPYRCNELVETLY 407


>AE013599-2548|AAF57802.1|  479|Drosophila melanogaster CG6401-PA
           protein.
          Length = 479

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 427 STEPVLCPYRCLSHVVSLY 371
           STEPV+CPYRC   V +LY
Sbjct: 389 STEPVMCPYRCNELVETLY 407


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,996,278
Number of Sequences: 53049
Number of extensions: 343899
Number of successful extensions: 1076
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)