Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_D03
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    24   0.64 
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   7.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   7.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   7.9  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 19  GHLKPAVFSDEPVGKGDSILAAG 87
           G+L P V   EP GK   I A G
Sbjct: 77  GYLSPEVLKKEPYGKPVDIWACG 99


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
          protein.
          Length = 117

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 23 CPQCSP 6
          CPQCSP
Sbjct: 80 CPQCSP 85


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 83  AAKIESPFPTGSSEKTAG 30
           A +  SP PTGSS + +G
Sbjct: 56  AQQHNSPSPTGSSPQHSG 73


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
          protein.
          Length = 117

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 23 CPQCSP 6
          CPQCSP
Sbjct: 80 CPQCSP 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,033
Number of Sequences: 438
Number of extensions: 1897
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)