Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D01
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 162 3e-40
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 162 3e-40
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 162 3e-40
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 160 1e-39
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 154 5e-38
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 73 2e-13
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 73 2e-13
BX537685-1|CAD97811.1| 520|Homo sapiens hypothetical protein pr... 29 4.3
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 100
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 162 bits (393), Expect = 3e-40
Identities = 70/98 (71%), Positives = 88/98 (89%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 102
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 160 bits (388), Expect = 1e-39
Identities = 69/98 (70%), Positives = 87/98 (88%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHL 102
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 154 bits (374), Expect = 5e-38
Identities = 66/98 (67%), Positives = 86/98 (87%)
Frame = +3
Query: 30 KAIVIDGRGHLLGRLASVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 209
+ +V+DGRGHLLGRLA+++AK +L G KVVVV CE INISGNF+RNKL +++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 210 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRL 102
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3
Query: 204 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 41
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +3
Query: 204 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRL 323
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRL 41
>BX537685-1|CAD97811.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 88 LRSCWKETKLWSFVVNRLTFPAISSGT 168
LRSC ++ K W RL PA+S T
Sbjct: 9 LRSCRRDLKKWDVQKRRLEIPAVSPST 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,111,813
Number of Sequences: 237096
Number of extensions: 953203
Number of successful extensions: 1893
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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