Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_D01
(325 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 23 0.70
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 1.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 2.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 2.8
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 3.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 3.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 4.9
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 4.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 20 6.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 20 6.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 20 6.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 20 6.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 20 6.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 20 6.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 20 6.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 20 8.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 8.6
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 23.4 bits (48), Expect = 0.70
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -1
Query: 163 LKKLPEMLICSQRTTTTLFPSSRTL 89
LK L + L+C ++ +TT+ P+++ +
Sbjct: 68 LKLLSDGLMCVEKVSTTIVPTTQEI 92
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 1.2
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 164 PEEIAGNVNLFTTNDHNFVSFQQDLSNY*GQSTEQVPAPVD---YYG 33
P+ I+ N N++N+ ++ Y EQ+P PV YYG
Sbjct: 301 PKIISSLSNKTIHNNNNYNNYNNKKLYYNINYIEQIPVPVPVPIYYG 347
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 1.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -3
Query: 182 HKLQFVPEEIAGNVNLFTTNDH----NFVSFQQDLSNY*GQSTEQVPAPVDYYGLI 27
+KL++ P+E G L +DH + V + NY + T A V Y GL+
Sbjct: 88 YKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNY--EVTLMTKATVYYSGLV 141
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 2.1
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 65 EQVPAPVDYYG 33
EQ+PAPV YYG
Sbjct: 336 EQIPAPV-YYG 345
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 2.8
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 140 NLFTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
N + ++N+ + + L Y + EQ+P PV Y
Sbjct: 96 NNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 130
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 3.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 213 PARGPFHFRAPSKI 254
P G F F+AP KI
Sbjct: 56 PPVGKFRFKAPQKI 69
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 3.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 213 PARGPFHFRAPSKI 254
P G F F+AP KI
Sbjct: 56 PPVGKFRFKAPQKI 69
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 206 CQPSPWTFSLQSSIKNPLE 262
C +T SLQ ++KNP+E
Sbjct: 577 CDNQTYT-SLQMAMKNPIE 594
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.6 bits (41), Expect = 4.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 145 FPAISSGTN*SLCHSFVKDVMSTQPVDL 228
FPA GT+ L KDV T P+DL
Sbjct: 657 FPANIEGTSYFLNDYKHKDVDVTLPLDL 684
Score = 19.8 bits (39), Expect = 8.6
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 149 RQFLQEQIEVYVIP 190
RQF + VY++P
Sbjct: 226 RQFYNDDANVYILP 239
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 134 FTTNDHNFVSFQQDLSNY*GQSTEQVPAPVDYY 36
+ ++N+ + + L Y + EQ+P PV Y
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIY 126
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.8 bits (39), Expect = 8.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -1
Query: 190 RNDINFNLFLKKLPEMLICSQRTTTTLFP 104
R +N FLK ++ Q T + +FP
Sbjct: 128 RVHVNEGQFLKAFVAAVLTRQDTQSVIFP 156
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 8.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 182 HKLQFVPEEIAGNVNLFTTNDH 117
+KL++ P+E G L +DH
Sbjct: 88 YKLRWEPKEYGGVKMLHVPSDH 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,835
Number of Sequences: 438
Number of extensions: 2166
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7093251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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