Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C24
(298 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 33 0.030
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 31 0.16
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 31 0.21
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 0.49
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 29 0.86
07_03_1378 + 26158233-26158562,26159075-26159176,26159551-261598... 28 1.1
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 28 1.1
06_01_0602 - 4342333-4342790,4342899-4345623 28 1.1
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 28 1.1
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 1.1
01_03_0047 + 11939747-11939857,11940058-11940121,11940123-119402... 28 1.1
07_03_1654 - 28416487-28416548,28416791-28416824,28418156-284182... 28 1.5
03_02_0967 + 12786219-12786305,12786716-12786781,12786897-127869... 28 1.5
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 27 2.0
04_04_1066 - 30533114-30533185,30533507-30533614,30533716-305340... 27 2.0
03_01_0579 - 4274927-4274998,4275320-4275427,4275529-4275904,427... 27 2.0
01_01_0527 + 3867621-3867764,3867855-3868128,3868216-3868315,386... 27 2.0
08_01_0925 + 9117217-9117576,9117674-9117749,9118460-9118592,911... 27 2.6
07_03_1586 - 27929947-27930056,27930143-27930286,27930377-279307... 27 2.6
07_03_1265 + 25304408-25304545,25304895-25305032,25305746-253058... 27 2.6
03_06_0662 + 35377974-35378270,35378354-35378623,35378795-353789... 27 2.6
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 27 3.5
02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722 27 3.5
05_04_0092 + 17851085-17851346,17852778-17852860,17853891-178539... 26 4.6
03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800 26 4.6
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 26 6.0
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 26 6.0
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 26 6.0
02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410 26 6.0
02_01_0485 + 3487578-3487635,3488281-3488399,3488600-3488698,348... 25 8.0
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 33.5 bits (73), Expect = 0.030
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLFS 297
G +R+Y+GNL D+TED+++ FS
Sbjct: 265 GYNRVYVGNLAWDITEDDLKKFFS 288
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 31.1 bits (67), Expect = 0.16
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G +LY+GNL +++TED+++ +F
Sbjct: 288 GARKLYVGNLHSNITEDQLRQVF 310
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 178 PLLDLPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
P +D A + V + + ++Y+GNL VT + ++N FS
Sbjct: 162 PNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTTEMLKNFFS 201
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
+LY+GN+ VT DE+ +F+
Sbjct: 71 KLYVGNIPRTVTNDELAAMFA 91
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLF 294
+R+YI NL DVT +E+Q LF
Sbjct: 441 ARIYISNLPPDVTVEELQELF 461
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 28.7 bits (61), Expect = 0.86
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
+SRLYI NL +T D++ NLF+
Sbjct: 512 KSRLYITNLPRSMTADKMVNLFA 534
>07_03_1378 +
26158233-26158562,26159075-26159176,26159551-26159850,
26160006-26160068
Length = 264
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 220 FNGRSRLYIGNLTNDVTEDEIQNLFS 297
F+ ++LY+GNL V ++NLFS
Sbjct: 176 FDSSNKLYVGNLAWGVDNSTLENLFS 201
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++LYI NL VT+++IQ LFS
Sbjct: 88 TKLYISNLHYGVTKEDIQELFS 109
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQSEVKFNGRSRLYIGNLTNDVTED 276
++G ++ + + A ++ G L L +D S F GR +GNL++ T D
Sbjct: 90 ALGNLSHLNILNLSGNLFAGRVPPELGNLFRLTLLDISSNTFVGRVPAELGNLSSLNTLD 149
Query: 277 EIQNLFS 297
+NLF+
Sbjct: 150 LSRNLFT 156
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 223 NGRSRLYIGNLTNDVTEDEIQNLF 294
N R+ +Y+GNL D+ E E+++LF
Sbjct: 5 NSRT-IYVGNLPGDIREREVEDLF 27
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQ 285
G +LY+GNL +++TED+++
Sbjct: 285 GARKLYVGNLHSNITEDQLR 304
>01_03_0047 +
11939747-11939857,11940058-11940121,11940123-11940253,
11940325-11940432,11942735-11942783,11943188-11943279,
11944394-11944468,11944553-11944658,11944740-11944786,
11944856-11944913,11945299-11945348,11945728-11945784,
11945909-11945916,11946020-11946055,11946904-11946937,
11947030-11947092,11947223-11947237
Length = 367
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 223 NGRSRLYIGNLTNDVTEDEIQNLF 294
N R+ +Y+GNL D+ E E+++LF
Sbjct: 161 NSRT-IYVGNLPGDIREREVEDLF 183
>07_03_1654 -
28416487-28416548,28416791-28416824,28418156-28418212,
28418401-28418450,28418968-28419025,28419136-28419182,
28419278-28419377,28419446-28419586,28419715-28419780,
28420024-28420118,28420440-28420629
Length = 299
Score = 27.9 bits (59), Expect = 1.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
+Y+GNL D+ E E+++LF
Sbjct: 75 IYVGNLPGDIREREVEDLF 93
>03_02_0967 +
12786219-12786305,12786716-12786781,12786897-12786971,
12787054-12787162,12787253-12787299,12787396-12787453,
12788193-12788242,12788459-12788504,12788758-12788808,
12789376-12789478,12789923-12789956,12790210-12790224
Length = 246
Score = 27.9 bits (59), Expect = 1.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
+Y+GNL D+ E E+++LF
Sbjct: 9 IYVGNLPGDIREREVEDLF 27
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
SRLY+GNL V+E +I +FS
Sbjct: 869 SRLYVGNLDFRVSESDIIKMFS 890
>04_04_1066 -
30533114-30533185,30533507-30533614,30533716-30534091,
30534173-30534330,30534416-30534536,30534613-30534831,
30534923-30535022,30535254-30535383,30535474-30535617
Length = 475
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQSEVKFNGRSRLYIG 249
KL+DL+G +DL + V+F+G + L +G
Sbjct: 120 KLQDLSGKTIDLSLSGKRAVEFDGETILEVG 150
>03_01_0579 -
4274927-4274998,4275320-4275427,4275529-4275904,
4275986-4276143,4276229-4276349,4276426-4276644,
4276736-4276835,4276923-4277196,4277287-4277430
Length = 523
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQSEVKFNGRSRLYIG 249
KL+DL+G +DL + V+F+G + L +G
Sbjct: 168 KLQDLSGKTIDLSLSGKRAVEFDGETILEVG 198
>01_01_0527 +
3867621-3867764,3867855-3868128,3868216-3868315,
3868407-3868625,3868702-3868822,3868908-3869065,
3869147-3869522,3869624-3869731,3870053-3870124
Length = 523
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQSEVKFNGRSRLYIG 249
KL+DL+G +DL + V+F+G + L +G
Sbjct: 168 KLQDLSGKTIDLSLSGKRAVEFDGETILEVG 198
>08_01_0925 +
9117217-9117576,9117674-9117749,9118460-9118592,
9118684-9118795,9119121-9119180,9119425-9119516,
9119628-9119697,9119776-9119880
Length = 335
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
L+IGNL V E+E+++LFS
Sbjct: 258 LFIGNLGETVIEEELRSLFS 277
>07_03_1586 -
27929947-27930056,27930143-27930286,27930377-27930704,
27931189-27931404,27932099-27932284,27932439-27932521,
27932621-27932752,27932943-27932999,27933352-27933412,
27933807-27933889,27933975-27934134
Length = 519
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 205 QSEVKFNGRS--RLYIGNLTNDVTEDEIQNLFS 297
QS V+ N + +L+IG L DV E+E+ LFS
Sbjct: 113 QSGVQGNAAAEQKLFIGMLPRDVKENEVSALFS 145
>07_03_1265 +
25304408-25304545,25304895-25305032,25305746-25305807,
25306321-25306423,25306560-25306636,25306915-25306971,
25307202-25307323,25307551-25307667,25308188-25308273,
25308387-25308560,25308671-25308940
Length = 447
Score = 27.1 bits (57), Expect = 2.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
+Y+GNL ++VT+D + LF
Sbjct: 292 VYVGNLAHEVTQDVLHRLF 310
>03_06_0662 +
35377974-35378270,35378354-35378623,35378795-35378973,
35380073-35380116,35380295-35380384,35380472-35380588,
35380679-35380803,35380883-35381155,35381253-35381386,
35381518-35381604,35381714-35381831
Length = 577
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 234 APTVELNFRLIYGR*IKQWPC*IFQLI 154
A + E NF +YG IK++PC I Q +
Sbjct: 299 AYSFEENFGFVYGEVIKKFPCDIHQSV 325
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 26.6 bits (56), Expect = 3.5
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNL 291
+ RL++GN+ ++EDE++N+
Sbjct: 188 KHRLFVGNVPKGLSEDELRNI 208
>02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722
Length = 1155
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQSEVKFNGRSRLYIGNLT 258
S+G N+ + E +L L G L L + S F+G + +GNLT
Sbjct: 533 SIGNLVNLDELDMENNLLMGSLPASLGNLKKLNRLSLSNNNFSGSIPVTLGNLT 586
>05_04_0092 +
17851085-17851346,17852778-17852860,17853891-17853942,
17854054-17854179,17854291-17854373,17855127-17855309,
17855731-17855947,17856156-17856299,17856375-17856446,
17857166-17857230,17857517-17857584,17857968-17858007,
17858843-17859013
Length = 521
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 133 REEMMLANKLKDLTGPLLDLPAIDQSEVKFNGRS----RLYIGNLTNDVTEDEIQNLFS 297
R++ + ++ P + E + NGR +L++G + +TEDE+ +F+
Sbjct: 9 RDQQNQQQQQEEAAAPAAAAAGVGGGEEQGNGRGEESVKLFVGQVPKQMTEDELAAMFA 67
>03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800
Length = 252
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLF 294
K +G Y+GNL DVTE ++++ F
Sbjct: 168 KADGCLSAYVGNLKWDVTETDLRDFF 193
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
SRLY+G+++ ++++NLFS
Sbjct: 18 SRLYVGHISLRTRAEDLENLFS 39
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 181 LLDLPAIDQSEVKFNGR 231
L +P++DQ+ +KFNGR
Sbjct: 1707 LRSVPSLDQTVIKFNGR 1723
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLFS 297
G LY+G+L VT+ ++ LFS
Sbjct: 37 GAQSLYVGDLEASVTDSQLYELFS 60
>02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410
Length = 1044
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 100 MGGQDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQSEVKFNGRSRLYIGNLTNDVTE 273
+G +M + + +L + G L +L + S+ KF+G IGNL N + E
Sbjct: 453 IGNLSSMSLLYLDNNLLTGSIPHTLGQLNNLVVLSLSQNKFSGEIPQSIGNL-NQLAE 509
>02_01_0485 +
3487578-3487635,3488281-3488399,3488600-3488698,
3488795-3488851,3488954-3489109,3489227-3489311,
3489489-3489579,3489693-3489857,3489923-3490045,
3490244-3490319,3490486-3490633,3490769-3491934,
3492041-3492231,3492321-3492513
Length = 908
Score = 25.4 bits (53), Expect = 8.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +1
Query: 97 SMGGQDNMKP----IQREEMMLANKL-KDLTGPLLDLPAIDQSEVKFNGRSRLYIGNLTN 261
S GG + P + E+ L ++L GPL+ LPA+ V F + TN
Sbjct: 6 SAGGVSDQPPSPPEVAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTN 65
Query: 262 DVTEDEIQN 288
E +I N
Sbjct: 66 KEMESQIPN 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,436,004
Number of Sequences: 37544
Number of extensions: 92152
Number of successful extensions: 283
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 327448548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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