Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C24
(298 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 37 0.013
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 37 0.013
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 37 0.013
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 37 0.013
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 37 0.013
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 37 0.013
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 37 0.013
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 37 0.013
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 37 0.013
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 37 0.013
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 37 0.013
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 36 0.023
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 36 0.023
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 36 0.023
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 36 0.023
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 36 0.023
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 33 0.22
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 33 0.22
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 33 0.22
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 33 0.22
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 33 0.22
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 33 0.22
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 33 0.22
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 31 0.88
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 31 0.88
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 31 0.88
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 31 0.88
AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8 pr... 31 0.88
AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8 pr... 31 0.88
AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8 pr... 31 0.88
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 31 0.88
AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens ... 31 0.88
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein. 31 0.88
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro... 31 0.88
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 30 1.5
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 30 1.5
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 30 1.5
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 30 1.5
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 30 1.5
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 30 1.5
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 30 1.5
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 30 1.5
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 30 1.5
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 29 2.7
M94055-1|AAA18895.1| 2005|Homo sapiens voltage-gated sodium chan... 29 2.7
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 29 2.7
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 29 2.7
AF327246-2|AAG53413.1| 2005|Homo sapiens voltage-gated sodium ch... 29 2.7
AF327246-1|AAG53412.1| 2005|Homo sapiens voltage-gated sodium ch... 29 2.7
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 29 2.7
AC011303-1|AAY14971.1| 2005|Homo sapiens unknown protein. 29 2.7
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 29 2.7
X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein. 29 3.6
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 29 3.6
M19725-1|AAA59904.1| 475|Homo sapiens SPTAN1 protein. 29 3.6
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 29 3.6
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 29 3.6
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 29 3.6
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 29 3.6
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 29 3.6
BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein. 29 3.6
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 29 3.6
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 29 3.6
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 29 3.6
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 29 3.6
AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha, non-er... 29 3.6
AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha, non-er... 29 3.6
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 29 3.6
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 29 3.6
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 29 3.6
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 29 3.6
AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha, non-er... 29 3.6
AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectr... 29 3.6
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 29 3.6
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 28 4.7
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 28 4.7
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 28 4.7
U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein. 27 8.2
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 27 8.2
D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein. 27 8.2
BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein. 27 8.2
BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich intera... 27 8.2
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 27 8.2
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 27 8.2
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 27 8.2
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 27 8.2
AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein. 27 8.2
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 27 8.2
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 27 8.2
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E F RSRL++GNL D+TE+E++ LF
Sbjct: 67 EKTFTQRSRLFVGNLPPDITEEEMRKLF 94
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQ-SEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
K+ D G +L + + E + R RL++GNL D+TEDE + LF+
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFA 318
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQ-SEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
K+ D G +L + + E + R RL++GNL D+TEDE + LF+
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFA 318
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQ-SEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
K+ D G +L + + E + R RL++GNL D+TEDE + LF+
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFA 318
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQ-SEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
K+ D G +L + + E + R RL++GNL D+TEDE + LF+
Sbjct: 198 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFA 245
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 157 KLKDLTGPLLDLPAIDQ-SEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
K+ D G +L + + E + R RL++GNL D+TEDE + LF+
Sbjct: 271 KISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFA 318
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 39 EKTYTQRCRLFVGNLPTDITEEDFKRLF 66
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 75 EKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 75 EKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 75 EKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 39 EKTYTQRCRLFVGNLPTDITEEDFKRLF 66
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 75 EKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 211 EVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E + R RL++GNL D+TE++ + LF
Sbjct: 75 EKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G R+Y+GNL DV E ++++LF
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLF 34
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G R+Y+GNL DV E ++++LF
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLF 34
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G R+Y+GNL DV E ++++LF
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLF 34
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G R+Y+GNL DV E ++++LF
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLF 34
>AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8
protein.
Length = 227
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+G L+ D++E ++QN FS
Sbjct: 9 RLYVGGLSQDISEADLQNQFS 29
>AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8
protein.
Length = 205
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+G L+ D++E ++QN FS
Sbjct: 9 RLYVGGLSQDISEADLQNQFS 29
>AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8
protein.
Length = 427
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+G L+ D++E ++QN FS
Sbjct: 9 RLYVGGLSQDISEADLQNQFS 29
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G R+Y+GNL DV E ++++LF
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLF 34
>AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ10187 fis, clone HEMBA1004596. ).
Length = 427
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+G L+ D++E ++QN FS
Sbjct: 9 RLYVGGLSQDISEADLQNQFS 29
>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
Length = 1167
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+G L+ D++E ++QN FS
Sbjct: 9 RLYVGGLSQDISEADLQNQFS 29
>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
protein.
Length = 1167
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+G L+ D++E ++QN FS
Sbjct: 9 RLYVGGLSQDISEADLQNQFS 29
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFS 212
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLFS 297
LP QS+ + ++++G T D+TEDE++ FS
Sbjct: 177 LPNSKQSQDEPLRSRKVFVGRCTGDMTEDELREFFS 212
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 223 NGRSR-LYIGNLTNDVTEDEIQNLFS 297
+G+ R LY+GNL+ DVTE I LFS
Sbjct: 5 DGQPRTLYVGNLSRDVTEVLILQLFS 30
>M94055-1|AAA18895.1| 2005|Homo sapiens voltage-gated sodium channel
protein.
Length = 2005
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 115 CLVHPWNLSYYYFAVDYVVVHFLRLVLDQIVCFLVSLV 2
C++ +L YYYF + + + F+ ++L + FL L+
Sbjct: 1578 CVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELI 1615
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL+ DVTE I LFS
Sbjct: 9 LYVGNLSRDVTEALILQLFS 28
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 223 NGRSR-LYIGNLTNDVTEDEIQNLFS 297
+G+ R LY+GNL+ DVTE I LFS
Sbjct: 5 DGQPRTLYVGNLSRDVTEVLILQLFS 30
>AF327246-2|AAG53413.1| 2005|Homo sapiens voltage-gated sodium channel
type II alpha subunit protein.
Length = 2005
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 115 CLVHPWNLSYYYFAVDYVVVHFLRLVLDQIVCFLVSLV 2
C++ +L YYYF + + + F+ ++L + FL L+
Sbjct: 1578 CVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELI 1615
>AF327246-1|AAG53412.1| 2005|Homo sapiens voltage-gated sodium channel
type II alpha subunit protein.
Length = 2005
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 115 CLVHPWNLSYYYFAVDYVVVHFLRLVLDQIVCFLVSLV 2
C++ +L YYYF + + + F+ ++L + FL L+
Sbjct: 1578 CVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELI 1615
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL+ DVTE I LFS
Sbjct: 9 LYVGNLSRDVTEALILQLFS 28
>AC011303-1|AAY14971.1| 2005|Homo sapiens unknown protein.
Length = 2005
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 115 CLVHPWNLSYYYFAVDYVVVHFLRLVLDQIVCFLVSLV 2
C++ +L YYYF + + + F+ ++L + FL L+
Sbjct: 1578 CVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELI 1615
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL+ DVTE I LFS
Sbjct: 47 LYVGNLSRDVTEALILQLFS 66
>X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 195 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 228
>M19725-1|AAA59904.1| 475|Homo sapiens SPTAN1 protein.
Length = 475
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDL-PAIDQSEVKFNGRSRLYIGNLTNDVTEDEI 282
GQD +K E +++K+K L G + DL A Q + K + S N DV E I
Sbjct: 163 GQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWI 222
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 213 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 246
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein.
Length = 2452
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDL-PAIDQSEVKFNGRSRLYIGNLTNDVTEDEI 282
GQD +K E +++K+K L G + DL A Q + K + S N DV E I
Sbjct: 1913 GQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWI 1972
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 170 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 203
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 170 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 203
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 153 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 186
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 196 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 229
>AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2472
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDL-PAIDQSEVKFNGRSRLYIGNLTNDVTEDEI 282
GQD +K E +++K+K L G + DL A Q + K + S N DV E I
Sbjct: 1933 GQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWI 1992
>AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2477
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDL-PAIDQSEVKFNGRSRLYIGNLTNDVTEDEI 282
GQD +K E +++K+K L G + DL A Q + K + S N DV E I
Sbjct: 1938 GQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWI 1997
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 196 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 229
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 210 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 243
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P IDQ + +R+Y+ ++ D+++D+I+++F
Sbjct: 213 PIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVF 246
>AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) variant protein.
Length = 2506
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDL-PAIDQSEVKFNGRSRLYIGNLTNDVTEDEI 282
GQD +K E +++K+K L G + DL A Q + K + S N DV E I
Sbjct: 1967 GQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWI 2026
>AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectrin
alpha protein.
Length = 2452
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDL-PAIDQSEVKFNGRSRLYIGNLTNDVTEDEI 282
GQD +K E +++K+K L G + DL A Q + K + S N DV E I
Sbjct: 1913 GQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWI 1972
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 193 PAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
P ID+S + + ++GNL DVTE+ I+ F
Sbjct: 83 PNIDRSRLPKSPPYTAFLGNLPYDVTEESIKEFF 116
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLF 294
++LYIGNL+ VT D+++ LF
Sbjct: 2 NKLYIGNLSPAVTADDLRQLF 22
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLF 294
++LYIGNL+ VT D+++ LF
Sbjct: 2 NKLYIGNLSPAVTADDLRQLF 22
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLF 294
++LYIGNL+ VT D+++ LF
Sbjct: 3 NKLYIGNLSPAVTADDLRQLF 23
>U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein.
Length = 1539
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEM-MLANKLKDLTGPLLDLP 195
S+ +NM P + ++ +L++ L LTGP+L+LP
Sbjct: 1343 SVTSPENMAPGKGSDLELLSSLLPQLTGPVLELP 1376
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFS 182
>D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein.
Length = 1512
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEM-MLANKLKDLTGPLLDLP 195
S+ +NM P + ++ +L++ L LTGP+L+LP
Sbjct: 1316 SVTSPENMAPGKGSDLELLSSLLPQLTGPVLELP 1349
>BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein.
Length = 1482
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEM-MLANKLKDLTGPLLDLP 195
S+ +NM P + ++ +L++ L LTGP+L+LP
Sbjct: 1286 SVTSPENMAPGKGSDLELLSSLLPQLTGPVLELP 1319
>BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich interactive
domain 1D protein.
Length = 1539
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEM-MLANKLKDLTGPLLDLP 195
S+ +NM P + ++ +L++ L LTGP+L+LP
Sbjct: 1343 SVTSPENMAPGKGSDLELLSSLLPQLTGPVLELP 1376
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFS 182
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFS 182
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFS 182
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 138 TKVHIGRLTRNVTKDHIMEIFS 159
>AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein.
Length = 1539
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 97 SMGGQDNMKPIQREEM-MLANKLKDLTGPLLDLP 195
S+ +NM P + ++ +L++ L LTGP+L+LP
Sbjct: 1343 SVTSPENMAPGKGSDLELLSSLLPQLTGPVLELP 1376
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 84 TKVHIGRLTRNVTKDHIMEIFS 105
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
++++IG LT +VT+D I +FS
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFS 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,471,479
Number of Sequences: 237096
Number of extensions: 556385
Number of successful extensions: 4594
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 4581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4594
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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