Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C24
(298 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein pr... 63 5e-11
M33496-2|AAA03215.1| 698|Drosophila melanogaster protein ( D.me... 63 5e-11
M33496-1|AAA03214.1| 700|Drosophila melanogaster protein ( D.me... 63 5e-11
AY119651-1|AAM50305.1| 700|Drosophila melanogaster RE58280p pro... 63 5e-11
AE014298-2380|AAX52501.1| 698|Drosophila melanogaster CG4211-PC... 63 5e-11
AE014298-2379|AAF48597.2| 700|Drosophila melanogaster CG4211-PA... 63 5e-11
AE014298-2378|AAN09398.1| 742|Drosophila melanogaster CG4211-PB... 63 5e-11
U31961-18|AAA84417.1| 642|Drosophila melanogaster protein ( Dro... 58 2e-09
AY119141-1|AAM51001.1| 411|Drosophila melanogaster RE44625p pro... 58 2e-09
AE014297-2248|AAF55347.1| 630|Drosophila melanogaster CG10328-P... 58 2e-09
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 28 2.4
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 28 2.4
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 28 2.4
L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding pr... 27 3.2
BT011006-1|AAR27877.1| 690|Drosophila melanogaster AT27578p pro... 27 3.2
AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p pro... 27 3.2
AY058617-1|AAL13846.1| 690|Drosophila melanogaster LD31194p pro... 27 3.2
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 27 3.2
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 27 3.2
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 27 3.2
AF231031-1|AAF68949.1| 690|Drosophila melanogaster rasputin pro... 27 3.2
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 27 3.2
AE014297-1713|AAN13573.1| 690|Drosophila melanogaster CG9412-PE... 27 3.2
AE014297-1712|AAN13572.1| 690|Drosophila melanogaster CG9412-PD... 27 3.2
AE014297-1711|AAN13571.1| 690|Drosophila melanogaster CG9412-PC... 27 3.2
AE014297-1710|AAG22151.2| 690|Drosophila melanogaster CG9412-PB... 27 3.2
AE014297-1709|AAF54965.3| 690|Drosophila melanogaster CG9412-PA... 27 3.2
AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA... 27 3.2
L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding pr... 27 4.2
BT003653-1|AAO39657.1| 626|Drosophila melanogaster AT01548p pro... 27 4.2
AY071494-1|AAL49116.1| 144|Drosophila melanogaster RE55691p pro... 27 4.2
AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p pro... 27 4.2
AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p pro... 27 4.2
AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p pro... 27 4.2
AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p pro... 27 4.2
AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding ... 27 4.2
AE014297-3862|AAF56517.3| 144|Drosophila melanogaster CG14545-P... 27 4.2
AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-P... 27 4.2
AE014297-2864|AAN13834.1| 529|Drosophila melanogaster CG17838-P... 27 4.2
AE014297-2863|AAN13833.1| 529|Drosophila melanogaster CG17838-P... 27 4.2
AE014297-2862|AAF55805.2| 707|Drosophila melanogaster CG17838-P... 27 4.2
AE014297-2861|AAN13831.1| 571|Drosophila melanogaster CG17838-P... 27 4.2
AE014297-2858|AAN13832.2| 563|Drosophila melanogaster CG17838-P... 27 4.2
AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-P... 27 4.2
AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA ... 27 4.2
AE014134-1228|AAN10619.1| 287|Drosophila melanogaster CG11266-P... 27 4.2
AE014134-1227|AAN10618.1| 287|Drosophila melanogaster CG11266-P... 27 4.2
AE014134-1226|AAN10615.2| 287|Drosophila melanogaster CG11266-P... 27 4.2
AE014134-1225|AAN10617.1| 287|Drosophila melanogaster CG11266-P... 27 4.2
AE014134-1224|AAN10616.1| 287|Drosophila melanogaster CG11266-P... 27 4.2
AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-P... 27 4.2
AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-P... 27 4.2
AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p pro... 27 5.6
AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding ... 27 5.6
AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA... 27 5.6
U81153-1|AAB39757.1| 212|Drosophila melanogaster synaptic prote... 26 9.7
M21152-1|AAA28506.1| 483|Drosophila melanogaster elav protein. 26 9.7
L22021-1|AAA16059.1| 212|Drosophila melanogaster synapse protei... 26 9.7
L13038-1|AAA02941.1| 465|Drosophila melanogaster polyadenylate-... 26 9.7
L13037-1|AAA28828.1| 465|Drosophila melanogaster polyadenylate-... 26 9.7
BT023789-1|AAZ41798.1| 212|Drosophila melanogaster GH28821p pro... 26 9.7
AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p pro... 26 9.7
AY070612-1|AAL48083.1| 470|Drosophila melanogaster RE71384p pro... 26 9.7
AY051822-1|AAK93246.1| 483|Drosophila melanogaster LD33076p pro... 26 9.7
AL022139-2|CAB37430.1| 483|Drosophila melanogaster EG:65F1.2,FB... 26 9.7
AL022139-1|CAA18091.1| 479|Drosophila melanogaster EG:65F1.2,FB... 26 9.7
AE014298-54|AAX52472.1| 479|Drosophila melanogaster CG4262-PB, ... 26 9.7
AE014298-53|AAF45517.2| 483|Drosophila melanogaster CG4262-PA, ... 26 9.7
AE014297-3445|AAN13978.1| 470|Drosophila melanogaster CG5422-PD... 26 9.7
AE014297-3444|AAN13977.1| 464|Drosophila melanogaster CG5422-PF... 26 9.7
AE014297-3443|AAF56224.1| 464|Drosophila melanogaster CG5422-PC... 26 9.7
AE014297-3442|AAF56225.1| 464|Drosophila melanogaster CG5422-PB... 26 9.7
AE014296-3787|EAL24571.1| 153|Drosophila melanogaster CG40452-P... 26 9.7
AE014296-3786|EAA46071.2| 212|Drosophila melanogaster CG40452-P... 26 9.7
AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA... 26 9.7
>X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein
protein.
Length = 700
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>M33496-2|AAA03215.1| 698|Drosophila melanogaster protein (
D.melanogaster no-on-transient A gene product, complete
cds. ).
Length = 698
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>M33496-1|AAA03214.1| 700|Drosophila melanogaster protein (
D.melanogaster no-on-transient A gene product, complete
cds. ).
Length = 700
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>AY119651-1|AAM50305.1| 700|Drosophila melanogaster RE58280p
protein.
Length = 700
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>AE014298-2380|AAX52501.1| 698|Drosophila melanogaster CG4211-PC,
isoform C protein.
Length = 698
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>AE014298-2379|AAF48597.2| 700|Drosophila melanogaster CG4211-PA,
isoform A protein.
Length = 700
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>AE014298-2378|AAN09398.1| 742|Drosophila melanogaster CG4211-PB,
isoform B protein.
Length = 742
Score = 63.3 bits (147), Expect = 5e-11
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 GGQDNMKPIQREEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDE 279
GG P E+ + +L+ ++GP +L ++ +E KF+GR+RLY+GNLTND+T+DE
Sbjct: 258 GGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSGRNRLYVGNLTNDITDDE 317
Query: 280 IQNLF 294
++ +F
Sbjct: 318 LREMF 322
>U31961-18|AAA84417.1| 642|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 642
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/54 (44%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 136 EEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E+ +A +L D++GP +LP I+ ++ KF GR+RLY+GNLT+D T+D+++ +F
Sbjct: 244 EDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMF 297
>AY119141-1|AAM51001.1| 411|Drosophila melanogaster RE44625p
protein.
Length = 411
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/54 (44%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 136 EEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E+ +A +L D++GP +LP I+ ++ KF GR+RLY+GNLT+D T+D+++ +F
Sbjct: 13 EDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMF 66
>AE014297-2248|AAF55347.1| 630|Drosophila melanogaster CG10328-PA
protein.
Length = 630
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/54 (44%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 136 EEMMLANKLKDLTGPLLDLPAID-QSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
E+ +A +L D++GP +LP I+ ++ KF GR+RLY+GNLT+D T+D+++ +F
Sbjct: 232 EDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMF 285
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQ--SEVKFNGRSRLYIGNLTNDVTEDE 279
G +++ P+Q + M + ++ P A+ S + R RLY+GN+ VTE+E
Sbjct: 50 GFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQAR-RLYVGNIPFGVTEEE 108
Query: 280 IQNLFS 297
+ F+
Sbjct: 109 MMEFFN 114
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQ--SEVKFNGRSRLYIGNLTNDVTEDE 279
G +++ P+Q + M + ++ P A+ S + R RLY+GN+ VTE+E
Sbjct: 50 GFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQAR-RLYVGNIPFGVTEEE 108
Query: 280 IQNLFS 297
+ F+
Sbjct: 109 MMEFFN 114
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 106 GQDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQ--SEVKFNGRSRLYIGNLTNDVTEDE 279
G +++ P+Q + M + ++ P A+ S + R RLY+GN+ VTE+E
Sbjct: 50 GFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQAR-RLYVGNIPFGVTEEE 108
Query: 280 IQNLFS 297
+ F+
Sbjct: 109 MMEFFN 114
>L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding
protein protein.
Length = 197
Score = 27.5 bits (58), Expect = 3.2
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
+R+Y+GNLT+ V +D+++ F+
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFT 28
>BT011006-1|AAR27877.1| 690|Drosophila melanogaster AT27578p
protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p
protein.
Length = 200
Score = 27.5 bits (58), Expect = 3.2
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
+R+Y+GNLT+ V +D+++ F+
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFT 31
>AY058617-1|AAL13846.1| 690|Drosophila melanogaster LD31194p
protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLF 294
R+Y+GNL D+ +IQ+LF
Sbjct: 8 RIYVGNLPPDIRTKDIQDLF 27
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLF 294
R+Y+GNL D+ +IQ+LF
Sbjct: 8 RIYVGNLPPDIRTKDIQDLF 27
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLF 294
R+Y+GNL D+ +IQ+LF
Sbjct: 8 RIYVGNLPPDIRTKDIQDLF 27
>AF231031-1|AAF68949.1| 690|Drosophila melanogaster rasputin
protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLF 294
R+Y+GNL D+ +IQ+LF
Sbjct: 8 RIYVGNLPPDIRTKDIQDLF 27
>AE014297-1713|AAN13573.1| 690|Drosophila melanogaster CG9412-PE,
isoform E protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AE014297-1712|AAN13572.1| 690|Drosophila melanogaster CG9412-PD,
isoform D protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AE014297-1711|AAN13571.1| 690|Drosophila melanogaster CG9412-PC,
isoform C protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AE014297-1710|AAG22151.2| 690|Drosophila melanogaster CG9412-PB,
isoform B protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AE014297-1709|AAF54965.3| 690|Drosophila melanogaster CG9412-PA,
isoform A protein.
Length = 690
Score = 27.5 bits (58), Expect = 3.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 217 KFNGRSRLYIGNLTNDVTEDEIQNLFS 297
+F +L++GN+ + +ED+++ +FS
Sbjct: 488 QFGDNQQLFLGNIPHHASEDDLREIFS 514
>AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA
protein.
Length = 200
Score = 27.5 bits (58), Expect = 3.2
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 232 SRLYIGNLTNDVTEDEIQNLFS 297
+R+Y+GNLT+ V +D+++ F+
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFT 31
>L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding
protein protein.
Length = 43
Score = 27.1 bits (57), Expect = 4.2
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
R+Y+GNLT+ V +D+++ F+
Sbjct: 1 RVYVGNLTDKVKKDDLEGEFT 21
>BT003653-1|AAO39657.1| 626|Drosophila melanogaster AT01548p
protein.
Length = 626
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 303 LYVRNLTQDVSEDKLKEQF 321
>AY071494-1|AAL49116.1| 144|Drosophila melanogaster RE55691p
protein.
Length = 144
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 109 QDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQSEVKFNGRSRL--YIGNLTNDVT 270
Q MK ++R+ ++L+ L ++DL A+DQ ++G + + Y+GN+ V+
Sbjct: 53 QAQMKALERKVSRAHDELRHLRRLIIDLDALDQ---LYDGENEVEEYVGNVEEAVS 105
>AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p
protein.
Length = 154
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL+ TE++I LFS
Sbjct: 32 LYVGNLSFYTTEEQIHELFS 51
>AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p
protein.
Length = 418
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
LP ++ E + + LY+GNL ++TE E+++ F
Sbjct: 220 LPTLEPPEDR--NITTLYVGNLPEEITEPELRDQF 252
>AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p
protein.
Length = 529
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 342 LYVRNLTQDVSEDKLKEQF 360
>AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p
protein.
Length = 594
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 333 GPMRLYVGSLHFNITEDMLRGIF 355
>AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding
protein 20 protein.
Length = 154
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL+ TE++I LFS
Sbjct: 32 LYVGNLSFYTTEEQIHELFS 51
>AE014297-3862|AAF56517.3| 144|Drosophila melanogaster CG14545-PA
protein.
Length = 144
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 109 QDNMKPIQREEMMLANKLKDLTGPLLDLPAIDQSEVKFNGRSRL--YIGNLTNDVT 270
Q MK ++R+ ++L+ L ++DL A+DQ ++G + + Y+GN+ V+
Sbjct: 53 QAQMKALERKVSRAHDELRHLRRLIIDLDALDQ---LYDGENEVEEYVGNVEEAVS 105
>AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-PB,
isoform B protein.
Length = 529
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 342 LYVRNLTQDVSEDKLKEQF 360
>AE014297-2864|AAN13834.1| 529|Drosophila melanogaster CG17838-PF,
isoform F protein.
Length = 529
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 342 LYVRNLTQDVSEDKLKEQF 360
>AE014297-2863|AAN13833.1| 529|Drosophila melanogaster CG17838-PC,
isoform C protein.
Length = 529
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 342 LYVRNLTQDVSEDKLKEQF 360
>AE014297-2862|AAF55805.2| 707|Drosophila melanogaster CG17838-PD,
isoform D protein.
Length = 707
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 384 LYVRNLTQDVSEDKLKEQF 402
>AE014297-2861|AAN13831.1| 571|Drosophila melanogaster CG17838-PE,
isoform E protein.
Length = 571
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 384 LYVRNLTQDVSEDKLKEQF 402
>AE014297-2858|AAN13832.2| 563|Drosophila melanogaster CG17838-PA,
isoform A protein.
Length = 563
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLF 294
LY+ NLT DV+ED+++ F
Sbjct: 376 LYVRNLTQDVSEDKLKEQF 394
>AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-PA
protein.
Length = 154
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL+ TE++I LFS
Sbjct: 32 LYVGNLSFYTTEEQIHELFS 51
>AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA
protein.
Length = 418
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 190 LPAIDQSEVKFNGRSRLYIGNLTNDVTEDEIQNLF 294
LP ++ E + + LY+GNL ++TE E+++ F
Sbjct: 220 LPTLEPPEDR--NITTLYVGNLPEEITEPELRDQF 252
>AE014134-1228|AAN10619.1| 287|Drosophila melanogaster CG11266-PG,
isoform G protein.
Length = 287
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 26 GPMRLYVGSLHFNITEDMLRGIF 48
>AE014134-1227|AAN10618.1| 287|Drosophila melanogaster CG11266-PF,
isoform F protein.
Length = 287
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 26 GPMRLYVGSLHFNITEDMLRGIF 48
>AE014134-1226|AAN10615.2| 287|Drosophila melanogaster CG11266-PE,
isoform E protein.
Length = 287
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 26 GPMRLYVGSLHFNITEDMLRGIF 48
>AE014134-1225|AAN10617.1| 287|Drosophila melanogaster CG11266-PD,
isoform D protein.
Length = 287
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 26 GPMRLYVGSLHFNITEDMLRGIF 48
>AE014134-1224|AAN10616.1| 287|Drosophila melanogaster CG11266-PC,
isoform C protein.
Length = 287
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 26 GPMRLYVGSLHFNITEDMLRGIF 48
>AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-PB,
isoform B protein.
Length = 594
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 333 GPMRLYVGSLHFNITEDMLRGIF 355
>AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-PA,
isoform A protein.
Length = 594
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 226 GRSRLYIGNLTNDVTEDEIQNLF 294
G RLY+G+L ++TED ++ +F
Sbjct: 333 GPMRLYVGSLHFNITEDMLRGIF 355
>AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p
protein.
Length = 374
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
R+++G LT +VT+D + +FS
Sbjct: 220 RIHVGRLTRNVTKDHVFEIFS 240
>AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding
protein S1 protein.
Length = 374
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
R+++G LT +VT+D + +FS
Sbjct: 220 RIHVGRLTRNVTKDHVFEIFS 240
>AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA
protein.
Length = 374
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
R+++G LT +VT+D + +FS
Sbjct: 220 RIHVGRLTRNVTKDHVFEIFS 240
>U81153-1|AAB39757.1| 212|Drosophila melanogaster synaptic protein
SNAP-25 protein.
Length = 212
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 241 YIGNLTNDVTEDEIQ 285
YIG +TND EDE++
Sbjct: 141 YIGRITNDAREDEME 155
>M21152-1|AAA28506.1| 483|Drosophila melanogaster elav protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
R+ L + L +TEDEI++LFS
Sbjct: 148 RTNLIVNYLPQTMTEDEIRSLFS 170
>L22021-1|AAA16059.1| 212|Drosophila melanogaster synapse protein
protein.
Length = 212
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 241 YIGNLTNDVTEDEIQ 285
YIG +TND EDE++
Sbjct: 141 YIGRITNDAREDEME 155
>L13038-1|AAA02941.1| 465|Drosophila melanogaster
polyadenylate-binding protein protein.
Length = 465
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>L13037-1|AAA28828.1| 465|Drosophila melanogaster
polyadenylate-binding protein protein.
Length = 465
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>BT023789-1|AAZ41798.1| 212|Drosophila melanogaster GH28821p
protein.
Length = 212
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 241 YIGNLTNDVTEDEIQ 285
YIG +TND EDE++
Sbjct: 141 YIGRITNDAREDEME 155
>AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p
protein.
Length = 449
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+GN+ VT++E+ F+
Sbjct: 112 RLYVGNIPFGVTDEEMMQFFN 132
>AY070612-1|AAL48083.1| 470|Drosophila melanogaster RE71384p
protein.
Length = 470
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>AY051822-1|AAK93246.1| 483|Drosophila melanogaster LD33076p
protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
R+ L + L +TEDEI++LFS
Sbjct: 148 RTNLIVNYLPQTMTEDEIRSLFS 170
>AL022139-2|CAB37430.1| 483|Drosophila melanogaster
EG:65F1.2,FBgn0000570;elav protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
R+ L + L +TEDEI++LFS
Sbjct: 148 RTNLIVNYLPQTMTEDEIRSLFS 170
>AL022139-1|CAA18091.1| 479|Drosophila melanogaster
EG:65F1.2,FBgn0000570;elav protein.
Length = 479
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
R+ L + L +TEDEI++LFS
Sbjct: 144 RTNLIVNYLPQTMTEDEIRSLFS 166
>AE014298-54|AAX52472.1| 479|Drosophila melanogaster CG4262-PB,
isoform B protein.
Length = 479
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
R+ L + L +TEDEI++LFS
Sbjct: 144 RTNLIVNYLPQTMTEDEIRSLFS 166
>AE014298-53|AAF45517.2| 483|Drosophila melanogaster CG4262-PA,
isoform A protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 229 RSRLYIGNLTNDVTEDEIQNLFS 297
R+ L + L +TEDEI++LFS
Sbjct: 148 RTNLIVNYLPQTMTEDEIRSLFS 170
>AE014297-3445|AAN13978.1| 470|Drosophila melanogaster CG5422-PD,
isoform D protein.
Length = 470
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>AE014297-3444|AAN13977.1| 464|Drosophila melanogaster CG5422-PF,
isoform F protein.
Length = 464
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>AE014297-3443|AAF56224.1| 464|Drosophila melanogaster CG5422-PC,
isoform C protein.
Length = 464
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>AE014297-3442|AAF56225.1| 464|Drosophila melanogaster CG5422-PB,
isoform B protein.
Length = 464
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 238 LYIGNLTNDVTEDEIQNLFS 297
LY+GNL + V+ED + LFS
Sbjct: 9 LYVGNLDSSVSEDLLIALFS 28
>AE014296-3787|EAL24571.1| 153|Drosophila melanogaster CG40452-PB,
isoform B protein.
Length = 153
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 241 YIGNLTNDVTEDEIQ 285
YIG +TND EDE++
Sbjct: 82 YIGRITNDAREDEME 96
>AE014296-3786|EAA46071.2| 212|Drosophila melanogaster CG40452-PA,
isoform A protein.
Length = 212
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 241 YIGNLTNDVTEDEIQ 285
YIG +TND EDE++
Sbjct: 141 YIGRITNDAREDEME 155
>AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA
protein.
Length = 449
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 235 RLYIGNLTNDVTEDEIQNLFS 297
RLY+GN+ VT++E+ F+
Sbjct: 112 RLYVGNIPFGVTDEEMMQFFN 132
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.313 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,864,513
Number of Sequences: 53049
Number of extensions: 159363
Number of successful extensions: 586
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 527894775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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