Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C24
         (298 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   0.80 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   0.80 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   7.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 2   HEGNKETNNLVQN*AEEMDHHVINS 76
           HE  +E   L+QN  +EM + V+ S
Sbjct: 349 HEKQQEITGLIQNIIQEMKNDVLLS 373


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 2   HEGNKETNNLVQN*AEEMDHHVINS 76
           HE  +E   L+QN  +EM + V+ S
Sbjct: 387 HEKQQEITGLIQNIIQEMKNDVLLS 411


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 275 SSVTSLVRLPIYKRLLPLNLTSD*SMAGKSSNG 177
           S+ TS   L + K+   + LTS  ++   S NG
Sbjct: 513 STATSTCSLAVAKQQNQVPLTSSSNVNNNSGNG 545


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.135    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,953
Number of Sequences: 438
Number of extensions: 901
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.1 bits)