Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C19
(176 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 79 4e-16
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 0.44
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 0.44
Z77653-2|CAB01125.3| 383|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z96102-1|CAE17867.1| 220|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical pr... 25 5.4
AC006696-9|AAF39992.1| 111|Caenorhabditis elegans Hypothetical ... 25 5.4
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 25 7.1
AF101318-1|AAC69342.2| 356|Caenorhabditis elegans Hypothetical ... 25 7.1
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 79.0 bits (186), Expect = 4e-16
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +2
Query: 65 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFY 175
MPKYYCDYCDT+LTHDSPSVRKTH GRKHKDNV+ +
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMF 37
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 17 EASVVCCDLLGNCIVKMPKYYCDYCDTYLTHDSPS-VRKTHCTGRK-HK 157
E + C L C + YYCD C T + D + V+ C K HK
Sbjct: 256 EGEIRVCSPLSKCHNTLGSYYCDSCPTGYSGDGGNCVKDDSCVKNKCHK 304
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 17 EASVVCCDLLGNCIVKMPKYYCDYCDTYLTHDSPS-VRKTHCTGRK-HK 157
E + C L C + YYCD C T + D + V+ C K HK
Sbjct: 256 EGEIRVCSPLSKCHNTLGSYYCDSCPTGYSGDGGNCVKDDSCVKNKCHK 304
>Z77653-2|CAB01125.3| 383|Caenorhabditis elegans Hypothetical
protein C13C12.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 35 CDLLGNCIVKMPKYYCDYCDTYLTHDSPSVRKTHCTGR 148
CD I + + YC YCD L H S +V +GR
Sbjct: 119 CDDFSGVIERNGRTYCRYCD--LCHVSQAVENELASGR 154
>Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical protein
F14B4.3 protein.
Length = 1127
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 14 HEASVVCCDLLGNCIVKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDN 163
H S V D L NC + Y C C + L+ S +H +K KD+
Sbjct: 1022 HGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSSRAGSHLLKKKRKDD 1071
>Z96102-1|CAE17867.1| 220|Caenorhabditis elegans Hypothetical
protein H39E23.2 protein.
Length = 220
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 44 LGNCIVKMPKYYCD--YCDTYLTHDSPSVRKTHCTGR-KHKD 160
LGNC++ K YC+ + + H + C GR K KD
Sbjct: 159 LGNCLLPDVKNYCEPNFLPIFKEHQDSRMFNLGCDGRLKFKD 200
>Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical
protein C34D1.2 protein.
Length = 114
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 74 YYCDYCDTYLTHDSPSVRKTH 136
YYC C L HD P RK H
Sbjct: 41 YYCQRC---LNHDVPRPRKNH 58
>AC006696-9|AAF39992.1| 111|Caenorhabditis elegans Hypothetical
protein W08E12.9 protein.
Length = 111
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 130 FPDTWRVMS*ICVTIITIIFRHFYY 56
FP ++ +S I T+ T+IF FYY
Sbjct: 22 FPKFFQKVSIISYTVETLIFSKFYY 46
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 35 CDLLGNCIVKMPKYY 79
CD GNC ++P YY
Sbjct: 250 CDTQGNCKCRLPGYY 264
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 35 CDLLGNCIVKMPKYY 79
CD GNC ++P YY
Sbjct: 250 CDTQGNCKCRLPGYY 264
>AF101318-1|AAC69342.2| 356|Caenorhabditis elegans Hypothetical
protein Y73C8C.4 protein.
Length = 356
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 74 YYCDYCDTYLTHDSPSVRKTHCTGRK 151
Y+C + +LT D S RK++ +G +
Sbjct: 127 YFCSFGINFLTKDPDSRRKSYVSGEE 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,098,992
Number of Sequences: 27780
Number of extensions: 68718
Number of successful extensions: 227
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 12,740,198
effective HSP length: 39
effective length of database: 11,656,778
effective search space used: 221478782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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