Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C18
(211 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051884-1|AAK93308.1| 580|Drosophila melanogaster LD37277p pro... 67 4e-12
AE014134-562|AAF51141.1| 580|Drosophila melanogaster CG8825-PA ... 67 4e-12
AJ277122-1|CAB86488.1| 580|Drosophila melanogaster Glaikit prot... 65 1e-11
AE014134-563|AAF51140.1| 210|Drosophila melanogaster CG31953-PA... 50 4e-07
AY060810-1|AAL28358.1| 161|Drosophila melanogaster GH27933p pro... 48 2e-06
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 31 0.17
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 31 0.17
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 31 0.17
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 31 0.17
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 31 0.17
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 31 0.17
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 31 0.17
AY121674-1|AAM52001.1| 611|Drosophila melanogaster RE22741p pro... 26 8.3
AY051608-1|AAK93032.1| 511|Drosophila melanogaster GH25251p pro... 26 8.3
AF296285-1|AAL33883.1| 611|Drosophila melanogaster SPZ3 protein. 26 8.3
AE014134-1358|AAF52574.2| 611|Drosophila melanogaster CG7104-PA... 26 8.3
AE014134-1299|AAF52531.1| 511|Drosophila melanogaster CG6730-PA... 26 8.3
>AY051884-1|AAK93308.1| 580|Drosophila melanogaster LD37277p
protein.
Length = 580
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +2
Query: 11 QASSLGSYGKQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLGG 190
Q+SS+GS G Q W+ DF++ K L P K+IYPS NV GSHDG+LGG
Sbjct: 384 QSSSIGSLGANVQAWIQQDFVNSLKKDSTPVGKLRQMPPFKMIYPSYGNVAGSHDGMLGG 443
Query: 191 GCRP 202
GC P
Sbjct: 444 GCLP 447
>AE014134-562|AAF51141.1| 580|Drosophila melanogaster CG8825-PA
protein.
Length = 580
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +2
Query: 11 QASSLGSYGKQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLGG 190
Q+SS+GS G Q W+ DF++ K L P K+IYPS NV GSHDG+LGG
Sbjct: 384 QSSSIGSLGANVQAWIQQDFVNSLKKDSTPVGKLRQMPPFKMIYPSYGNVAGSHDGMLGG 443
Query: 191 GCRP 202
GC P
Sbjct: 444 GCLP 447
>AJ277122-1|CAB86488.1| 580|Drosophila melanogaster Glaikit protein
protein.
Length = 580
Score = 65.3 bits (152), Expect = 1e-11
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +2
Query: 11 QASSLGSYGKQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLGG 190
Q+SS+GS G Q W+ DF++ K L P K+IYPS NV GSHDG+LGG
Sbjct: 384 QSSSIGSLGANVQAWIQQDFVNSPKKDSTPVGKLRQMPPFKMIYPSYGNVAGSHDGMLGG 443
Query: 191 GCRP 202
GC P
Sbjct: 444 GCLP 447
>AE014134-563|AAF51140.1| 210|Drosophila melanogaster CG31953-PA
protein.
Length = 210
Score = 50.0 bits (114), Expect = 4e-07
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +2
Query: 65 DFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLGGGCRP 202
DF++ K L P K+IYPS NV GSHDG+LGGGC P
Sbjct: 12 DFVNSLKKDSTPVGKLRQMPPFKMIYPSYGNVAGSHDGMLGGGCLP 57
>AY060810-1|AAL28358.1| 161|Drosophila melanogaster GH27933p
protein.
Length = 161
Score = 47.6 bits (108), Expect = 2e-06
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2
Query: 122 PELKVIYPSLENVKGSHDGLLGGGCRP 202
P K+IYPS NV GSHDG+LGGGC P
Sbjct: 2 PPFKMIYPSYGNVAGSHDGMLGGGCLP 28
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 602 PPPKSPDRDPFNISNDTYYT 621
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p
protein.
Length = 1964
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 599 PPPKSPDRDPFNISNDTYYT 618
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p
protein.
Length = 2096
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 599 PPPKSPDRDPFNISNDTYYT 618
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 599 PPPKSPDRDPFNISNDTYYT 618
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 599 PPPKSPDRDPFNISNDTYYT 618
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 599 PPPKSPDRDPFNISNDTYYT 618
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 192 PPPNRPSCDPFTFSNDGYMT 133
PPP P DPF SND Y T
Sbjct: 599 PPPKSPDRDPFNISNDTYYT 618
>AY121674-1|AAM52001.1| 611|Drosophila melanogaster RE22741p
protein.
Length = 611
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 210 PAQGRQPPPNRPSCDPFTFSNDGYMTFNSGG 118
PA +Q P + DP F N+ Y SGG
Sbjct: 41 PADHQQQTPAEAAADPEYFKNNPYAPPQSGG 71
>AY051608-1|AAK93032.1| 511|Drosophila melanogaster GH25251p
protein.
Length = 511
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 32 YGKQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKV--IYPSLENVKGSHDGLL 184
YGK +LW+ G+ L + +K +LS+ LK +Y L + G DGLL
Sbjct: 67 YGKTFRLWILGECLIYTKDLKYFESILSSSTLLKKAHLYRFLRDFLG--DGLL 117
>AF296285-1|AAL33883.1| 611|Drosophila melanogaster SPZ3 protein.
Length = 611
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 210 PAQGRQPPPNRPSCDPFTFSNDGYMTFNSGG 118
PA +Q P + DP F N+ Y SGG
Sbjct: 41 PADHQQQTPAEAAADPEYFKNNPYAPPQSGG 71
>AE014134-1358|AAF52574.2| 611|Drosophila melanogaster CG7104-PA
protein.
Length = 611
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 210 PAQGRQPPPNRPSCDPFTFSNDGYMTFNSGG 118
PA +Q P + DP F N+ Y SGG
Sbjct: 41 PADHQQQTPAEAAADPEYFKNNPYAPPQSGG 71
>AE014134-1299|AAF52531.1| 511|Drosophila melanogaster CG6730-PA
protein.
Length = 511
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 32 YGKQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKV--IYPSLENVKGSHDGLL 184
YGK +LW+ G+ L + +K +LS+ LK +Y L + G DGLL
Sbjct: 67 YGKTFRLWILGECLIYTKDLKYFESILSSSTLLKKAHLYRFLRDFLG--DGLL 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,100,624
Number of Sequences: 53049
Number of extensions: 175432
Number of successful extensions: 655
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 24,988,368
effective HSP length: 49
effective length of database: 22,388,967
effective search space used: 447779340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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