Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C18
(211 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100657-5|AAC68960.1| 451|Caenorhabditis elegans Hypothetical ... 42 6e-05
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 28 1.0
AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical... 26 3.2
AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical... 26 3.2
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 26 3.2
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 25 5.6
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 25 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 5.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 5.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 5.6
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 25 7.3
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 25 7.3
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 25 7.3
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 25 7.3
AF047663-5|AAC04446.2| 247|Caenorhabditis elegans Hypothetical ... 25 7.3
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL034393-8|CAA22313.1| 241|Caenorhabditis elegans Hypothetical ... 25 9.7
AF039042-9|AAC48245.1| 431|Caenorhabditis elegans Hypothetical ... 25 9.7
>AF100657-5|AAC68960.1| 451|Caenorhabditis elegans Hypothetical
protein F52C12.1 protein.
Length = 451
Score = 41.9 bits (94), Expect = 6e-05
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 8 AQASSLGSYGKQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLG 187
AQ SS+GS G P W G FL ++ N S P ++ +++PS+E+V+ S G G
Sbjct: 262 AQCSSIGSLGSAPINWFRGQFLQS-LEGANPSPK-QKPAKMYLVFPSVEDVRTSCQGYAG 319
Query: 188 G 190
G
Sbjct: 320 G 320
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 1 ARGPGQQPRQLREAASVMADRRFLASFH*NQEPVADAVDAARVESHIPVVREREGITR 174
+RG Q P+ R+ S A R AS H P A ++ + + V ITR
Sbjct: 372 SRGVSQGPQASRDFRSARAPRDHRASLHELPRPQTSAASQGQIVNLVQVKSRSASITR 429
>AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1d protein.
Length = 354
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -2
Query: 198 RQPPPNRPSCDPFTFSNDG---YMTFNSGG 118
+ PP NRP+ D + F DG MTF G
Sbjct: 75 KNPPANRPTIDVWEFKLDGEVLTMTFTCDG 104
>AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1b protein.
Length = 483
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -2
Query: 198 RQPPPNRPSCDPFTFSNDG---YMTFNSGG 118
+ PP NRP+ D + F DG MTF G
Sbjct: 75 KNPPANRPTIDVWEFKLDGEVLTMTFTCDG 104
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -2
Query: 198 RQPPPNRPSCDPFTFSNDG---YMTFNSGG 118
+ PP NRP+ D + F DG MTF G
Sbjct: 78 KNPPANRPTIDVWEFKLDGEVLTMTFTCDG 107
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 91 QEPVADAVDAARVESHIPVVRERE 162
+ P ++A DAA +E H+ VV E
Sbjct: 246 EAPTSEAQDAAPIEEHVEVVHVAE 269
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 174 SCDPFTFSNDGYMTFNSGGV 115
SC PF F+ G T+ +GGV
Sbjct: 45 SCSPFRFTGYGCNTYLTGGV 64
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 38 KQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLG 187
K + + T + ++ I+ Q+ + +L+ + LENVKG +D L G
Sbjct: 508 KYIEKFTTSETVNSQIRDVAQNMLTEHNADLETLMGKLENVKGEYDTLDG 557
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 38 KQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLG 187
K + + T + ++ I+ Q+ + +L+ + LENVKG +D L G
Sbjct: 508 KYIEKFTTSETVNSQIRDVAQNMLTEHNADLETLMGKLENVKGEYDTLDG 557
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 38 KQPQLWLTGDFLHHFIKIKNQSQMLSTPPELKVIYPSLENVKGSHDGLLG 187
K + + T + ++ I+ Q+ + +L+ + LENVKG +D L G
Sbjct: 91 KYIEKFTTSETVNSQIRDVAQNMLTEHNADLETLMGKLENVKGEYDTLDG 140
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 77 DARNRRSAITEAASRSCR 24
DA NR +TEA+S+ CR
Sbjct: 711 DALNRELQLTEASSQKCR 728
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 77 DARNRRSAITEAASRSCR 24
DA NR +TEA+S+ CR
Sbjct: 711 DALNRELQLTEASSQKCR 728
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 77 DARNRRSAITEAASRSCR 24
DA NR +TEA+S+ CR
Sbjct: 711 DALNRELQLTEASSQKCR 728
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 77 DARNRRSAITEAASRSCR 24
DA NR +TEA+S+ CR
Sbjct: 711 DALNRELQLTEASSQKCR 728
>AF047663-5|AAC04446.2| 247|Caenorhabditis elegans Hypothetical
protein W09G12.8 protein.
Length = 247
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 104 QMLSTPPELKVIYPSLENVKGSHD 175
++ S P E + YP LENV G D
Sbjct: 38 ELESRPVEFENQYPKLENVSGLED 61
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 204 QGRQP-PPNRPSCDPFTFSNDGYMTFNSGGVDSICDW 97
+G P NRP P S GY FN+ G + DW
Sbjct: 1221 RGNHPYAQNRPYAPPN--SGMGYQNFNNSGYGASGDW 1255
>AL034393-8|CAA22313.1| 241|Caenorhabditis elegans Hypothetical
protein Y18D10A.10 protein.
Length = 241
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 186 PNRPSCDPF-TFS-NDGYMTFNSG 121
PN+PSC P TF DG+ T G
Sbjct: 154 PNKPSCTPLDTFEWTDGHTTGTDG 177
>AF039042-9|AAC48245.1| 431|Caenorhabditis elegans Hypothetical
protein ZK697.2 protein.
Length = 431
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 71 LHHFIKIKNQSQMLSTPP 124
L HFIKI N+ + +PP
Sbjct: 138 LQHFIKIPNEPSLAVSPP 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,749,415
Number of Sequences: 27780
Number of extensions: 77454
Number of successful extensions: 295
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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