Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C14
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 38 0.021
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 38 0.021
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 38 0.021
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 38 0.021
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 38 0.021
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 38 0.021
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 38 0.021
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 36 0.083
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 36 0.083
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 36 0.083
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 36 0.083
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 32 1.4
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 48
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 48
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 48
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 39
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 48
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 48
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.021
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG H ++ +KIRTS FRR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRR 48
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 35.9 bits (79), Expect = 0.083
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG HG++ +KIR S F+R
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQR 48
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 35.9 bits (79), Expect = 0.083
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG HG++ +KIR S F+R
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQR 48
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 35.9 bits (79), Expect = 0.083
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG HG++ +KIR S F+R
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQR 48
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 35.9 bits (79), Expect = 0.083
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ V+KG HG++ +KIR S F+R
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQR 48
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 426 KALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
KALKA++ +KG H + +K RTS+ F+R
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQR 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,219,382
Number of Sequences: 237096
Number of extensions: 550194
Number of successful extensions: 859
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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