Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C14
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    44   2e-04
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    44   2e-04
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    42   6e-04
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    37   0.014

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 429 ALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
           A K Q+K++KG  G R RKIRT+VHFRR
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRR 161


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 429 ALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
           A K Q+K++KG  G R RKIRT+VHFRR
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRR 169


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 429 ALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
           A K Q+K++KG  G R RKIR +VHFRR
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRR 169


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 429 ALKAQRKVVKGEHGNRVRKIRTSVHFRR 512
           A K Q+K++K   G R RKIRT+VHFRR
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRR 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,585,492
Number of Sequences: 53049
Number of extensions: 153186
Number of successful extensions: 319
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)