Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C12
         (248 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    24   0.72 
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   1.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   1.7  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   2.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   5.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       21   5.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    21   6.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    21   8.8  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       21   8.8  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    21   8.8  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 24.2 bits (50), Expect = 0.72
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 149 NVLLSHPRAWGQGHR 105
           N+  SHPR +GQG R
Sbjct: 5   NLWYSHPRKYGQGSR 19


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 142 RTLIESLTLVLNFYPLTCSPVWRD 213
           R L E L +    Y   C P+W++
Sbjct: 93  RRLFEELNIKKLCYEQDCEPIWKE 116


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 42  HH*HAAVTGFLVLACVGLVPCTMPLPP 122
           HH  AA   F++ +C  L     PLPP
Sbjct: 363 HHFSAASQRFMLRSCNSLGDHIPPLPP 389


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 45  H*HAAVTGFLVLACVGLVPCTMPLPPCPWMR 137
           H   +V  F ++A +  V   +PLP   W R
Sbjct: 152 HDQLSVADFAIVATLSTVAIFVPLPADRWPR 182


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 63  TGFLVLACVGLVPCTMPLPPCPW 131
           + F++ A V  VP   P P  PW
Sbjct: 384 SSFMLQAFVVCVPVQRPKPNPPW 406


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 30  MYCHHH*HAAVTGFLVL 80
           M+CH+  H AV   LVL
Sbjct: 612 MHCHYEWHTAVGMALVL 628


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 96  QDQHKRVLETRLLPH 52
           +DQHK+ L  +L PH
Sbjct: 339 KDQHKQDLPEQLEPH 353



 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 69  FLVLACVGLVPCTMPLPP 122
           F+V+   G+V C++ LPP
Sbjct: 75  FVVVEMRGIVFCSVYLPP 92


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 151 IESLTLVLNFYPLTCSPVWRDLAKELMSNKS 243
           ++S   +L    L+C+P++R       SN++
Sbjct: 309 VQSFNALLTSALLSCTPIFRSPPNPPWSNRT 339


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 163 LNSRLMFCYLIQGHGGKGI 107
           LN  +  CYL     G GI
Sbjct: 327 LNGFIQHCYLAVSESGSGI 345


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 96  QDQHKRVLETRLLPHVN 46
           Q  H+R+ E RL  HVN
Sbjct: 203 QKAHQRIDEDRLEIHVN 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,221
Number of Sequences: 2352
Number of extensions: 5053
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)