Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C12
(248 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76658-1|AAD14230.1| 92|Homo sapiens ic cancer cell line PT45,... 29 2.7
BC020565-1|AAH20565.1| 538|Homo sapiens solute carrier family 2... 29 3.6
U66060-17|AAC13334.1| 115|Homo sapiens V_segment translation pr... 27 8.3
U03115-3|AAA17711.1| 113|Homo sapiens T-cell receptor beta chai... 27 8.3
BC117495-1|AAI17496.1| 905|Homo sapiens stonin 2 protein. 27 8.3
BC117493-1|AAI17494.1| 905|Homo sapiens stonin 2 protein. 27 8.3
BC069587-1|AAH69587.1| 904|Homo sapiens STON2 protein protein. 27 8.3
BC069502-1|AAH69502.1| 905|Homo sapiens stonin 2 protein. 27 8.3
BC069389-1|AAH69389.1| 905|Homo sapiens stonin 2 protein. 27 8.3
BC069359-1|AAH69359.1| 905|Homo sapiens stonin 2 protein. 27 8.3
AF449430-1|AAL47008.1| 905|Homo sapiens endocytosis protein HST... 27 8.3
AF380833-1|AAK76362.1| 886|Homo sapiens endocytosis protein HST... 27 8.3
AF009663-19|AAB63913.1| 115|Homo sapiens TCRBV12S1 protein. 27 8.3
AF009661-3|AAB63897.1| 115|Homo sapiens TCRBV12S1 protein. 27 8.3
AB208948-1|BAD92185.1| 932|Homo sapiens Stonin 2 variant protein. 27 8.3
>S76658-1|AAD14230.1| 92|Homo sapiens ic cancer cell line PT45,
mRNA Partial, 278 protein.
Length = 92
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 35 LSSSLTCGSNRVSSTRLCWSCP 100
L++ L CG+ SS+ LCWS P
Sbjct: 24 LTAELGCGAGSASSSGLCWSQP 45
>BC020565-1|AAH20565.1| 538|Homo sapiens solute carrier family 22
(organic cation transporter), member 17 protein.
Length = 538
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 60 VTGFLVLACVGLVPCTMPLPPCPWMR*QNINREFN 164
+TG L +GL C P+ P W + N NR+ N
Sbjct: 374 LTGIASLVLLGLWDCEHPIFPTVWAQQGNPNRDLN 408
>U66060-17|AAC13334.1| 115|Homo sapiens V_segment translation
product protein.
Length = 115
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -2
Query: 163 LNSRLMF----CYLIQGHGGKGIVQGTRPTQASTRNPVTAAC 50
+ +RL F C L GH GI Q R T PVT C
Sbjct: 1 MGTRLFFYVALCLLWTGHMDAGITQSPRHKVTETGTPVTLRC 42
>U03115-3|AAA17711.1| 113|Homo sapiens T-cell receptor beta chain V
region precursor protein.
Length = 113
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -2
Query: 163 LNSRLMF----CYLIQGHGGKGIVQGTRPTQASTRNPVTAAC 50
+ +RL F C L GH GI Q R T PVT C
Sbjct: 1 MGTRLFFYVALCLLWTGHMDAGITQSPRHKVTETGTPVTLRC 42
>BC117495-1|AAI17496.1| 905|Homo sapiens stonin 2 protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>BC117493-1|AAI17494.1| 905|Homo sapiens stonin 2 protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>BC069587-1|AAH69587.1| 904|Homo sapiens STON2 protein protein.
Length = 904
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>BC069502-1|AAH69502.1| 905|Homo sapiens stonin 2 protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>BC069389-1|AAH69389.1| 905|Homo sapiens stonin 2 protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>BC069359-1|AAH69359.1| 905|Homo sapiens stonin 2 protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>AF449430-1|AAL47008.1| 905|Homo sapiens endocytosis protein HSTNB
variant protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 129 TMPCWTCPSFDSLGRCPL 146
>AF380833-1|AAK76362.1| 886|Homo sapiens endocytosis protein HSTNB
protein.
Length = 886
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 110 TMPCWTCPSFDSLGRCPL 127
>AF009663-19|AAB63913.1| 115|Homo sapiens TCRBV12S1 protein.
Length = 115
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -2
Query: 163 LNSRLMF----CYLIQGHGGKGIVQGTRPTQASTRNPVTAAC 50
+ +RL F C L GH GI Q R T PVT C
Sbjct: 1 MGTRLFFYVALCLLWTGHMDAGITQSPRHKVTETGTPVTLRC 42
>AF009661-3|AAB63897.1| 115|Homo sapiens TCRBV12S1 protein.
Length = 115
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -2
Query: 163 LNSRLMF----CYLIQGHGGKGIVQGTRPTQASTRNPVTAAC 50
+ +RL F C L GH GI Q R T PVT C
Sbjct: 1 MGTRLFFYVALCLLWTGHMDAGITQSPRHKVTETGTPVTLRC 42
>AB208948-1|BAD92185.1| 932|Homo sapiens Stonin 2 variant protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 77 TRLCWSCPLYDALAPMPL 130
T CW+CP +D+L PL
Sbjct: 141 TMPCWTCPSFDSLGRCPL 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,867,340
Number of Sequences: 237096
Number of extensions: 752385
Number of successful extensions: 1793
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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