Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C12
         (248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   1.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   1.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   2.3  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    19   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   7.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   7.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          19   9.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   9.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 196 SPVWRDLAKELMS 234
           SP W+DLAK+  S
Sbjct: 748 SPEWKDLAKKARS 760


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 108 MPLPPCPWM 134
           +P+ PCPW+
Sbjct: 230 VPVKPCPWI 238


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 90  GLVPCTMPLPPCPWMR*Q 143
           G     +P P  PWMR Q
Sbjct: 250 GAASANLPSPLYPWMRSQ 267


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 173 RTRVKLSINVLLSHPRAWGQGHRTRDK 93
           R  + LS+++  +  + W Q  RT+ K
Sbjct: 38  RLNLALSLSLTETQVKIWFQNRRTKWK 64


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 205 WRDLAKELMSNKS 243
           W DLA E   N+S
Sbjct: 634 WNDLAMEFYYNRS 646


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 205 WRDLAKELMSNKS 243
           W DLA E   N+S
Sbjct: 672 WNDLAMEFYYNRS 684


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 122 WGQGHRTRDKTNTS 81
           WGQGH       TS
Sbjct: 267 WGQGHAILKGLKTS 280


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 228 KFFCKITPHRR 196
           +FFC++ P +R
Sbjct: 134 RFFCEVRPIKR 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,600
Number of Sequences: 438
Number of extensions: 1620
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)