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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C11
         (367 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...   209   6e-55
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379    208   1e-54
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998    208   1e-54
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467          208   1e-54
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...   206   3e-54
03_01_0034 + 318432-318825,318902-319851                              206   3e-54
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...   206   3e-54
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349    206   3e-54
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788...   126   7e-30
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257...   126   7e-30
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918...   125   1e-29
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...   107   3e-24
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324...   101   2e-22
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602...    30   0.48 
07_03_0944 + 22787933-22789906                                         27   3.4  
04_04_0103 + 22808670-22810007                                         27   3.4  
04_03_0198 - 12555866-12556382,12556584-12556822                       27   4.5  
05_01_0192 + 1394342-1396645                                           27   6.0  
09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,956...    26   7.9  
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047...    26   7.9  
08_01_0830 + 8055118-8056698                                           26   7.9  
06_03_1276 - 28907726-28907842,28908012-28908062,28908146-289082...    26   7.9  
02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,256...    26   7.9  
01_06_1606 + 38587709-38588002                                         26   7.9  

>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score =  209 bits (510), Expect = 6e-55
 Identities = 94/117 (80%), Positives = 107/117 (91%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 160 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 219

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+ NP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 220 NEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 276


>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score =  208 bits (508), Expect = 1e-54
 Identities = 94/117 (80%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 204 NEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260


>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score =  208 bits (508), Expect = 1e-54
 Identities = 94/117 (80%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 204 NEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score =  208 bits (508), Expect = 1e-54
 Identities = 94/117 (80%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 204 NEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260


>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score =  206 bits (504), Expect = 3e-54
 Identities = 93/117 (79%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 324 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 383

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 384 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 440


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score =  206 bits (504), Expect = 3e-54
 Identities = 93/117 (79%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score =  206 bits (504), Expect = 3e-54
 Identities = 93/117 (79%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 165 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 224

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 225 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 281


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score =  206 bits (504), Expect = 3e-54
 Identities = 93/117 (79%), Positives = 106/117 (90%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE   +D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEAL+DIC+RTLK+  P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PF
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260


>11_02_0058 +
           7879859-7879951,7880844-7881078,7881165-7881535,
           7881648-7882304
          Length = 451

 Score =  126 bits (303), Expect = 7e-30
 Identities = 56/117 (47%), Positives = 82/117 (70%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSG+G+LL+ ++  +Y  +    ++V PSP+VS +VVEPYN+VLS H L+E+TD    +D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLD 205

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEA++DIC R+L +  PTY +LN LVS  +S +T  LRF G LN D+ +   N+VP+
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPY 262


>03_05_0974 +
           29324025-29324117,29325064-29325298,29325385-29325755,
           29325864-29326520
          Length = 451

 Score =  126 bits (303), Expect = 7e-30
 Identities = 56/117 (47%), Positives = 82/117 (70%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSG+G+LL+ ++  +Y  +    ++V PSP+VS +VVEPYN+VLS H L+E+TD    +D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLD 205

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEA++DIC R+L +  PTY +LN LVS  +S +T  LRF G LN D+ +   N+VP+
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPY 262


>07_03_0994 +
           23190344-23190456,23191367-23191581,23191663-23191862,
           23192420-23192928,23193048-23193363
          Length = 450

 Score =  125 bits (301), Expect = 1e-29
 Identities = 54/117 (46%), Positives = 82/117 (70%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
           GSG+G+LL+ ++  +Y  +    +++ PSP+VS  VVEPYN+VLS H L+E+TD    +D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLD 205

Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
           NEA++DIC R+L +  PTY +LN L+S  +S +TT LRF G +N D+ +   N+VP+
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPY 262


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score =  107 bits (256), Expect = 3e-24
 Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 21/138 (15%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSP---------------------KVSDTVVEP 131
           GSG+G+LL+ ++  +Y  +    +++ PSP                     K+S  VVEP
Sbjct: 206 GSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEP 265

Query: 132 YNAVLSIHQLVENTDETYCIDNEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRF 311
           YN+VLS H L+E+TD    +DNEA++DIC R+L +  PTY +LN L+S  +S +TT LRF
Sbjct: 266 YNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRF 325

Query: 312 PGQLNADLRKLAVNMVPF 365
            G +N D+ +   N+VP+
Sbjct: 326 DGAINVDITEFQTNLVPY 343


>05_01_0412 -
           3248405-3248458,3248533-3248637,3248950-3249078,
           3249279-3249353,3249520-3249624,3249714-3249767,
           3249970-3250370,3250583-3250694,3250886-3251086,
           3251844-3251972
          Length = 454

 Score =  101 bits (242), Expect = 2e-22
 Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +3

Query: 15  GSGMGTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNAVLSIHQLVENTDETYCI 191
           GSGMG+ L+  + + Y  +++ TYSV P+  + SD VV+PYN++L++ +L  N D    +
Sbjct: 146 GSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVL 205

Query: 192 DNEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP 362
           DN AL  I    L + NPT+   N LVS  MS  TT LR+PG +N DL  L  +++P
Sbjct: 206 DNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIP 262


>03_05_0136 +
           21158917-21159939,21160183-21160241,21160259-21160294,
           21160345-21160387,21160582-21160698,21162090-21162179,
           21162329-21162436,21162547-21162588
          Length = 505

 Score = 30.3 bits (65), Expect = 0.48
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 22  VWAPFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQM--KPTA*T 195
           +W P SS  +  +T T   + + SSP P   TPSS+ ++  +L+   ++  +   P A +
Sbjct: 57  IW-PSSSSSNSGNTSTRKASPSPSSPAPAASTPSSSSSVATTLADHLAEDSLDAPPAALS 115

Query: 196 TRRSLTSV 219
            +RS T +
Sbjct: 116 RQRSCTEL 123


>07_03_0944 + 22787933-22789906
          Length = 657

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = +2

Query: 134 QCSSLYPPASRKHR*NLLHRQRGAL*HLL*NP*SS*SHIR*LEPPGVADHVWRYHLPQVP 313
           Q  S+Y PA +    N LH+Q+G L  +  N   S    R L+P  +A   +    P+ P
Sbjct: 474 QGHSVYSPAHKSALLNKLHQQKGLLSPVNTNRMYS---PRALDPSSLAHSPFGGMSPRSP 530

Query: 314 RSVECGSP 337
           R++E  SP
Sbjct: 531 RTMEPTSP 538


>04_04_0103 + 22808670-22810007
          Length = 445

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +2

Query: 65  RQNHEHILSRPLAQSIRHRRRTLQCSSLYPPASRKHR*NLLHRQRGAL*HLL 220
           R  HE  L+   AQ  R  RR  + +   PP +R  R  +L  Q G L H+L
Sbjct: 58  RSGHEGALA---AQDHRVVRREEEAAEEEPPEARYRRKAMLRAQDGVLRHML 106


>04_03_0198 - 12555866-12556382,12556584-12556822
          Length = 251

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 17/51 (33%), Positives = 20/51 (39%)
 Frame = +3

Query: 210 DICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP 362
           D CYR L    PT    N  +S   S      RFPG    D+    V+  P
Sbjct: 53  DFCYRGLVTTGPTVNPFNIALSSAFS-----TRFPGVNGLDISAARVDFSP 98


>05_01_0192 + 1394342-1396645
          Length = 767

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 58  STPTES*THTQSSPRPKYQTPSSNP 132
           STPT S + + S P P+  TPSS P
Sbjct: 245 STPTSS-SSSPSKPSPRMATPSSPP 268


>09_02_0460 +
           9567656-9567766,9567849-9567949,9568527-9568647,
           9568733-9568792,9569022-9569089,9569469-9569535,
           9569586-9569666,9570152-9570217,9570372-9570410,
           9570527-9570609,9570712-9570823,9570902-9570982,
           9571132-9571290,9571397-9571504,9571570-9571674,
           9571765-9571905,9572007-9572147,9572205-9572426,
           9573617-9573730,9573830-9574045,9574373-9574432,
           9574513-9574626,9574735-9574820,9574904-9575012,
           9575099-9575277,9575357-9575429
          Length = 938

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 205 SLTSVIEPLKFLIPH 249
           S+TSV +PLKFL PH
Sbjct: 80  SMTSVPKPLKFLRPH 94


>08_02_1508 +
           27602104-27602265,27602398-27602449,27603357-27604757,
           27604833-27606140,27606594-27607435
          Length = 1254

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +1

Query: 34  FSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKP 183
           F++     STP      TQ  P   + TPS+ P +     T  S ++  P
Sbjct: 302 FTTTEKTPSTPRSRAPTTQKQPSSTFFTPSTTPKIPQRTDTDISSSKDAP 351


>08_01_0830 + 8055118-8056698
          Length = 526

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 34  FSSQRSVKSTPTES*THTQSSPRPKYQTPSSNP 132
           +SS  SV S+P  S ++  SS  P + + SS+P
Sbjct: 54  WSSASSVASSPVVSSSYMSSSGSPAWSSASSSP 86


>06_03_1276 -
           28907726-28907842,28908012-28908062,28908146-28908254,
           28908345-28908430,28908537-28908650,28908731-28908790,
           28909088-28909303,28909401-28909514,28910632-28910853,
           28910946-28911050,28911136-28911276,28911368-28911472,
           28911538-28911645,28911753-28911911,28912060-28912140,
           28912219-28912330,28912433-28912515,28912631-28912669,
           28913061-28913126,28913601-28913643,28913969-28914036,
           28914264-28914323,28914409-28914529,28915167-28915267,
           28915354-28915494
          Length = 873

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 205 SLTSVIEPLKFLIPH 249
           S+TSV +PLKFL PH
Sbjct: 90  SMTSVPKPLKFLRPH 104


>02_01_0356 +
           2563773-2563898,2564031-2564131,2564375-2564498,
           2564592-2564651,2564762-2564829,2565520-2565562,
           2566026-2566091,2566237-2566275,2566375-2566457,
           2566654-2566765,2566840-2566923,2567026-2567184,
           2567268-2567372,2567451-2567555,2567661-2567801,
           2567920-2568024,2568111-2568335,2568762-2568875,
           2568963-2569178,2569674-2569733,2569827-2569940,
           2570047-2570132,2570211-2570319,2570408-2570586,
           2570673-2570741,2570792-2571005
          Length = 968

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 205 SLTSVIEPLKFLIPH 249
           S+TSV +PLKFL PH
Sbjct: 85  SMTSVPKPLKFLRPH 99


>01_06_1606 + 38587709-38588002
          Length = 97

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 355 MFTASLRRSAFN*PGNLRQVVTPDMVSDTRWFKSP 251
           M  A+ RR      G+ R+V  PD    TRW  +P
Sbjct: 20  MEQAAARRRKTQPAGSKRKVPEPDTFCPTRWLPTP 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,317,570
Number of Sequences: 37544
Number of extensions: 273633
Number of successful extensions: 793
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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