Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C11
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 237 2e-63
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 235 5e-63
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 233 4e-62
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 231 1e-61
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 231 1e-61
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 231 1e-61
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 155 9e-39
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 155 9e-39
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 120 2e-28
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 116 5e-27
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 116 7e-27
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 116 7e-27
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 116 7e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 116 7e-27
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 115 1e-26
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 115 1e-26
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 114 2e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 114 2e-26
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 114 2e-26
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 114 2e-26
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 114 2e-26
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 113 4e-26
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 113 5e-26
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 102 9e-23
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 87 5e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 87 5e-18
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 35 0.016
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.25
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.25
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 0.77
M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 28 1.8
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 28 2.4
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 3.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 3.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 3.1
U13643-4|AAA21082.2| 258|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 4.1
Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 26 7.2
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 26 7.2
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 26 7.2
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 26 7.2
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 26 7.2
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 26 7.2
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 26 7.2
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 26 9.5
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 26 9.5
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 26 9.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 237 bits (580), Expect = 2e-63
Identities = 109/117 (93%), Positives = 115/117 (98%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSGMGTLLISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCID
Sbjct: 144 GSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEAL+DICYRTLK+ NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF
Sbjct: 204 NEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 235 bits (576), Expect = 5e-63
Identities = 108/117 (92%), Positives = 115/117 (98%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSGMGTLLISKIREE+PDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCID
Sbjct: 144 GSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEAL+DICYRTLK+ NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF
Sbjct: 204 NEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 233 bits (569), Expect = 4e-62
Identities = 106/117 (90%), Positives = 115/117 (98%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSGMGTLLISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDET+CID
Sbjct: 144 GSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCID 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEAL+DIC+RTLK+ NPTYGDLNHLVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPF
Sbjct: 204 NEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 231 bits (565), Expect = 1e-61
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSGMGTLLISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNA LS+HQLVENTDET+CID
Sbjct: 144 GSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCID 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEAL+DIC+RTLK+ PTYGDLNHLVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPF
Sbjct: 204 NEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 231 bits (565), Expect = 1e-61
Identities = 106/117 (90%), Positives = 112/117 (95%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSGMGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTD T+CID
Sbjct: 144 GSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCID 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEAL+DIC+RTLK+ PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPF
Sbjct: 204 NEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 231 bits (565), Expect = 1e-61
Identities = 106/117 (90%), Positives = 112/117 (95%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSGMGTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTD T+CID
Sbjct: 144 GSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCID 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEAL+DIC+RTLK+ PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPF
Sbjct: 204 NEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 260
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 155 bits (376), Expect = 9e-39
Identities = 71/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA+LS+ L++N DE +CID
Sbjct: 144 GSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCID 203
Query: 195 NEALFDICYRTLKVPN-PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 344
NEA+FDIC LK+ N TYGDLNHL SL +SG+TT RF G L D+RKL
Sbjct: 204 NEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL 254
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 155 bits (376), Expect = 9e-39
Identities = 71/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA+LS+ L++N DE +CID
Sbjct: 144 GSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCID 203
Query: 195 NEALFDICYRTLKVPN-PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 344
NEA+FDIC LK+ N TYGDLNHL SL +SG+TT RF G L D+RKL
Sbjct: 204 NEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL 254
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 120 bits (290), Expect = 2e-28
Identities = 49/117 (41%), Positives = 81/117 (69%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG ++L+ ++ EY + +S+ P+P++S +VVEPYN++L+ H +E++D ++ +D
Sbjct: 143 GSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVD 202
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L+V PTY +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 203 NEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 259
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 116 bits (279), Expect = 5e-27
Identities = 49/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D + +D
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L V P+Y +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 204 NEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 116 bits (278), Expect = 7e-27
Identities = 49/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D + +D
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L V P+Y +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 204 NEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 116 bits (278), Expect = 7e-27
Identities = 49/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D + +D
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L V P+Y +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 204 NEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 116 bits (278), Expect = 7e-27
Identities = 49/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D + +D
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L V P+Y +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 204 NEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 116 bits (278), Expect = 7e-27
Identities = 49/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D + +D
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L V P+Y +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 204 NEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 115 bits (276), Expect = 1e-26
Identities = 50/117 (42%), Positives = 79/117 (67%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ EY + +++ P+P+VS ++VEPYN++L H +E++D T+ +D
Sbjct: 152 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVD 211
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + PTY +LN LV+ +S +T LRF G LN DL + N+VP+
Sbjct: 212 NEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPY 268
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 115 bits (276), Expect = 1e-26
Identities = 50/117 (42%), Positives = 79/117 (67%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ EY + +++ P+P+VS ++VEPYN++L H +E++D T+ +D
Sbjct: 124 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVD 183
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + PTY +LN LV+ +S +T LRF G LN DL + N+VP+
Sbjct: 184 NEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPY 240
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 114 bits (275), Expect = 2e-26
Identities = 48/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++ +D
Sbjct: 146 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVD 205
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+
Sbjct: 206 NEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 262
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 114 bits (275), Expect = 2e-26
Identities = 48/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++ +D
Sbjct: 145 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVD 204
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+
Sbjct: 205 NEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 261
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 114 bits (275), Expect = 2e-26
Identities = 48/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++ +D
Sbjct: 146 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVD 205
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+
Sbjct: 206 NEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 262
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 114 bits (275), Expect = 2e-26
Identities = 48/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN++L+ H +E++D ++ +D
Sbjct: 146 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVD 205
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+
Sbjct: 206 NEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPY 262
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 114 bits (274), Expect = 2e-26
Identities = 48/117 (41%), Positives = 77/117 (65%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ +Y + +S+ P+P+V VVEPYN++L+ H +E++D + +D
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVD 203
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L V P+Y +LN ++S +S +T LRF G LN DL + N+VP+
Sbjct: 204 NEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPY 260
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 113 bits (272), Expect = 4e-26
Identities = 48/117 (41%), Positives = 79/117 (67%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +LL+ ++ E+ + +SV P+P+VS +VVEPYN++L+ H +E +D ++ +D
Sbjct: 149 GSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVD 208
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++D+C + L V P+Y +LN L++ +S +T LRF G LN DL + N+VP+
Sbjct: 209 NEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPY 265
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 113 bits (271), Expect = 5e-26
Identities = 48/117 (41%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG LL+ ++ +Y + + + P+P+VS ++VEPYN++L+ H +E++D ++ +D
Sbjct: 151 GSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVD 210
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA++DIC R L + PTY +LN L++ +S VT LRF G LN DL + N+VP+
Sbjct: 211 NEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPY 267
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 102 bits (244), Expect = 9e-23
Identities = 44/117 (37%), Positives = 78/117 (66%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCID 194
GSG +L++ ++ +Y + +S+ P+P++S ++VEPYN++L+ H +E++D ++ +D
Sbjct: 146 GSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMD 205
Query: 195 NEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
NEA+++I L V +PTY LN L++ +S +T LRF G LN DL + N+VP+
Sbjct: 206 NEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPY 262
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 86.6 bits (205), Expect = 5e-18
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNAVLSIHQLVENTDETYCI 191
GSG G+LL+ ++RE +P +++ TYSV + S D VV PYN VLS+ +L+EN D +
Sbjct: 148 GSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVL 207
Query: 192 DNEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
DN AL + K PT+ +N LV+ MS T RF + +R L ++ PF
Sbjct: 208 DNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPF 263
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 86.6 bits (205), Expect = 5e-18
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Frame = +3
Query: 15 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNAVLSIHQLVENTDETYCI 191
GSG G+LL+ ++RE +P +++ TYSV + S D VV PYN VLS+ +L+EN D +
Sbjct: 148 GSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVL 207
Query: 192 DNEALFDICYRTLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPF 365
DN AL + K PT+ +N LV+ MS T RF + +R L ++ PF
Sbjct: 208 DNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPF 263
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 35.1 bits (77), Expect = 0.016
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 31 PFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSL 210
P ++ +TPT + T T ++P TP++ T + +T+ + T PT TT +
Sbjct: 132 PTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 191
Query: 211 TSVIEPLKFLIPHTVT*T 264
T+ P T T T
Sbjct: 192 TTTAPTTTTTTPTTTTTT 209
Score = 33.5 bits (73), Expect = 0.047
Identities = 22/88 (25%), Positives = 38/88 (43%)
Frame = +1
Query: 58 STPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSLTSVIEPLKF 237
+T T + T T ++P TP++ T + +T+ + T PT TT + T+ +
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 238 LIPHTVT*TTWCR*PCLALPPASGSPVS 321
P T T TT P + +P +
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPAT 249
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 58 STPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSLTSVIEPLKF 237
+T T + T T ++P TP++ T + +T+ + T PT TT + T+
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Query: 238 LIPHTVT*T 264
+P T T T
Sbjct: 215 TVPTTTTTT 223
Score = 27.9 bits (59), Expect = 2.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 37 SSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQ-MKPTA*TTRRSLT 213
++ + +TPT + T T + P TP++ PT + +T+ + + K T TT+ + T
Sbjct: 250 TTSETTTTTPTTT-TQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKT 308
Query: 214 SVIEPLKFLIPHTVT*TTWCR*PC 285
+ P T T+ C C
Sbjct: 309 TSTPTTTTTTPKTPFDTSKCTVMC 332
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +1
Query: 31 PFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSL 210
P ++ + +T TE+ T ++ TP++ T + +T+ + T PT TT +
Sbjct: 125 PTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 184
Query: 211 TSVIEPLKFLIPHTVT*T 264
T+ P T T T
Sbjct: 185 TTTTPTTTTTAPTTTTTT 202
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 67 TES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSLTSVIEPLKFLIP 246
T + T T ++P TP++ T + +T+ + T PT TT + T+ P
Sbjct: 151 TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTP 210
Query: 247 HTVT 258
T T
Sbjct: 211 TTTT 214
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 31 PFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRS 207
P + S +T T + T T ++P TP++ T + +T+ + T PT TT RS
Sbjct: 80 PSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRS 138
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 31 PFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TT 198
P ++ +TPT + T T ++P+P T +S T + +++ + T +PT TT
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTT 652
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 31 PFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TT 198
P ++ +TPT + T T ++P+P T +S T + +++ + T +PT TT
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTT 652
>Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical
protein C50B6.3 protein.
Length = 526
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +3
Query: 24 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 203
M + L+ K REE R S +V + V E Y+ + I++L N ++
Sbjct: 412 MQSELLKKFREEVQRRYAEGSSASDQERVRNMVYEAYDNIYHINRLSANEGPRILTSDQK 471
Query: 204 LFDICYRTLKVPNPTYGD 257
L Y+T PT+ +
Sbjct: 472 LVMQQYKTTFRQGPTFAE 489
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 0.77
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 31 PFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSL 210
P ++ + +TPT + T + ++ TP++ T + +T+ S T K T TT
Sbjct: 283 PTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTA-STTTFKTTTITTTTQT 341
Query: 211 TSVIEPLKFLIPHTVT*TT 267
T+ P T T TT
Sbjct: 342 TTPTTTATTTKPTTTTPTT 360
>M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical
protein B0303.4 protein.
Length = 616
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 55 KSTPTE-S*THTQSSPRPKYQTPSSNPTMQFSLSTS*SK-TQMKP 183
+S P+E S H + Y TPS NP MQ LST S TQ +P
Sbjct: 187 ESRPSENSSRHDYVTTDVTYTTPSINPDMQHHLSTRTSNVTQTQP 231
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 28.7 bits (61), Expect = 1.3
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 28 APFSSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMK-PTA*TTRR 204
+P + SV ST E + +S+ P TPS++ + + +TS + T + PT TT +
Sbjct: 179 SPKPTYPSVPST-FEFEKYPKSTEEPT-STPSTSTSTTTTTTTSTTTTTTEAPTTTTTIK 236
Query: 205 SLTSVIEPLKFLIPHTVT 258
+ T IEP IP TVT
Sbjct: 237 TTTESIEP----IPQTVT 250
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 49 SVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSLTSVIE 225
S+ S+PT + +S+PR TP P ++ SL + Q A TRRS T++ E
Sbjct: 293 SIISSPTPPKSPPKSTPRTSKSTPPKRPYLKRSLEQARGGAQKSYPA-RTRRS-TNIFE 349
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 27.9 bits (59), Expect = 2.4
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SIRHEAPVWAPFSSQRSVKSTPTES*THTQSS-PRPKYQTPSSNPTMQFSLSTS*SKTQ 174
S+ +EAP + SS R+ + PT + P PK QTPSS+ + Q +L S+ Q
Sbjct: 952 SLSNEAPK-SELSSARATPTIPTPIPLIVEEKKPEPKSQTPSSS-SSQLNLQAMLSQMQ 1008
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 37 SSQRSVKSTPTES*T-HTQSSPRPKYQTPSSN--PTMQFSLSTS*SKTQMKPTA*TTRRS 207
S+ S +TP S T + SSP+P Q+P+ N T S+ M P++ T S
Sbjct: 368 STLASSTATPGSSSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 427
Query: 208 LTSVIEP 228
S I P
Sbjct: 428 SQSTITP 434
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 37 SSQRSVKSTPTES*T-HTQSSPRPKYQTPSSN--PTMQFSLSTS*SKTQMKPTA*TTRRS 207
S+ S +TP S T + SSP+P Q+P+ N T S+ M P++ T S
Sbjct: 575 STLASSTATPGSSSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 634
Query: 208 LTSVIEP 228
S I P
Sbjct: 635 SQSTITP 641
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 37 SSQRSVKSTPTES*T-HTQSSPRPKYQTPSSN--PTMQFSLSTS*SKTQMKPTA*TTRRS 207
S+ S +TP S T + SSP+P Q+P+ N T S+ M P++ T S
Sbjct: 575 STLASSTATPGSSSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 634
Query: 208 LTSVIEP 228
S I P
Sbjct: 635 SQSTITP 641
>U13643-4|AAA21082.2| 258|Caenorhabditis elegans Hypothetical
protein T07E3.3 protein.
Length = 258
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 9 ARGSGMGTLLISKIREEYPD 68
ARGS + L ++ IRE+YPD
Sbjct: 119 ARGSVIPQLFLTSIREQYPD 138
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 40 SQRSVKSTPTES*THTQSSPRPKYQTPSSN 129
+Q+ ST T+ H Q P P+Y PSS+
Sbjct: 99 NQQHQASTSTQQFHHPQRPPPPQYDQPSSS 128
>Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical
protein C16C10.6 protein.
Length = 392
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 43 QRSVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMKP 183
QR+ TP S +PR + +T S +PT + S+ + S ++ P
Sbjct: 280 QRNYTPTPPSSDDEGARAPRARRRTSSPSPTSRKSIESRESGSRRSP 326
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 64 PTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQM 177
PT H+ +SPR + ++P+S+ FS S + T M
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPASSGCSSFSTIASIAATSM 1386
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 64 PTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQM 177
PT H+ +SPR + ++P+S+ FS S + T M
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPASSGCSSFSTIASIAATSM 1386
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 231 KVPNPTYGDLNHLVSLTMSGVTTCLRFPGQ 320
K+P T+ L+HL SG+ + ++FP +
Sbjct: 671 KLPRTTFVFLDHLKDTDTSGMDSTMKFPAE 700
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 94 SPRPKYQTPSSNPTMQFSLSTS*SKTQMKPTA*TTRRSLTS 216
+P P + +PS++ + S STS S ++ T T RS T+
Sbjct: 89 TPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTT 129
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 231 KVPNPTYGDLNHLVSLTMSGVTTCLRFPGQ 320
K+P T+ L+HL SG+ + ++FP +
Sbjct: 671 KLPRTTFVFLDHLKDTDTSGMDSTMKFPAE 700
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 299 GGNARHGQRHQVVQVTVCGIRNFKGSITDVKERL-VVYAV 183
G +RH ++ + C ++ + I DVK+ L ++Y++
Sbjct: 1853 GEISRHSDNEKICEQAACTLKTYHNVIVDVKKELEILYSL 1892
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 64 PTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQM 177
PT H+ +SPR + ++P+S+ FS S + T M
Sbjct: 1226 PTHPHGHSPTSPRCRSRSPASSGCSSFSTIASIAATSM 1263
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 64 PTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQM 177
PT H+ +SPR + ++P+S+ FS S + T M
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPASSGCSSFSTIASIAATSM 1386
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 64 PTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQM 177
PT H+ +SPR + ++P+S+ FS S + T M
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPASSGCSSFSTIASIAATSM 1386
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 26.2 bits (55), Expect = 7.2
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 49 SVKSTPTES*THTQSSPRPKYQTPSSNPTMQFSLSTS*SKTQMK--PTA*TTRRSLTS 216
++KSTPT T +S+P TP++ TM+ + +T + T MK PT TT ++ S
Sbjct: 167 TIKSTPTTP-TTMKSTP----TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 219
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 26 GHPSHLKDP*RVPRQNHEHILSRPLAQSI---RHR 121
GH S L +P R P + L PL +SI RHR
Sbjct: 3114 GHHSALHEPNRTPNRRSTEALVLPLHESIDTNRHR 3148
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 26 GHPSHLKDP*RVPRQNHEHILSRPLAQSI---RHR 121
GH S L +P R P + L PL +SI RHR
Sbjct: 3123 GHHSALHEPNRTPNRRSTEALVLPLHESIDTNRHR 3157
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 189 IDNEALFDICYRTLKVPNPTY 251
I NEA+ D+CY+ + P Y
Sbjct: 363 ISNEAMSDLCYQIYSIRPPRY 383
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 189 IDNEALFDICYRTLKVPNPTY 251
I NEA+ D+CY+ + P Y
Sbjct: 651 ISNEAMSDLCYQIYSIRPPRY 671
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 1 SIRHEAPVWAPFSSQRSVKSTPTES*THTQSSPRPKYQTPSSN 129
SI PV SS S S P+ES + +P P P+SN
Sbjct: 1632 SIPSTLPVAPSSSSVPSSPSAPSESTSTVSETPAPVNVNPASN 1674
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,663
Number of Sequences: 27780
Number of extensions: 210615
Number of successful extensions: 692
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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