Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C10
         (264 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   113   3e-26
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   113   3e-26
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   113   3e-26
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   113   3e-26
AY071228-1|AAL48850.1|  326|Drosophila melanogaster RE26822p pro...    27   4.8  
AE014297-2781|AAG22161.1|  355|Drosophila melanogaster CG5085-PA...    27   4.8  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  113 bits (272), Expect = 3e-26
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +2

Query: 35  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTIHLMRR 214
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+  HLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 215 LIHSQVRGISVKLQEE 262
           L HSQVRGIS+KLQEE
Sbjct: 61  LRHSQVRGISIKLQEE 76


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  113 bits (272), Expect = 3e-26
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +2

Query: 35  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTIHLMRR 214
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+  HLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 215 LIHSQVRGISVKLQEE 262
           L HSQVRGIS+KLQEE
Sbjct: 61  LRHSQVRGISIKLQEE 76


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  113 bits (272), Expect = 3e-26
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +2

Query: 35  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTIHLMRR 214
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+  HLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 215 LIHSQVRGISVKLQEE 262
           L HSQVRGIS+KLQEE
Sbjct: 61  LRHSQVRGISIKLQEE 76


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  113 bits (272), Expect = 3e-26
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +2

Query: 35  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTIHLMRR 214
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+  HLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 215 LIHSQVRGISVKLQEE 262
           L HSQVRGIS+KLQEE
Sbjct: 61  LRHSQVRGISIKLQEE 76


>AY071228-1|AAL48850.1|  326|Drosophila melanogaster RE26822p
           protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 106 KPSVVFFDYNLRRFFYGLSPNTTHDC 29
           KP +VFF  NL + FY        DC
Sbjct: 229 KPDIVFFGENLPKRFYSSPEEDFQDC 254


>AE014297-2781|AAG22161.1|  355|Drosophila melanogaster CG5085-PA
           protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 106 KPSVVFFDYNLRRFFYGLSPNTTHDC 29
           KP +VFF  NL + FY        DC
Sbjct: 198 KPDIVFFGENLPKRFYSSPEEDFQDC 223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,775,673
Number of Sequences: 53049
Number of extensions: 172334
Number of successful extensions: 545
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)