Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C10
         (264 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   2.6  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          20   4.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    20   4.5  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 153 SFLLSLFATKLLGSPSI 203
           S LLSL  T L+ SPS+
Sbjct: 4   SILLSLLITCLICSPSV 20


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 124 GIEVKSKPSVVFFDYNLRRFFYGLSPNTT 38
           GI  K     V++DY    +F  LSPN T
Sbjct: 60  GIHRKKVLLSVWWDYKGIVYFELLSPNRT 88


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 182 IAGFTIHLMRRLIHSQVRGISVKLQ 256
           + G  I  +  LIH Q+ G+S +++
Sbjct: 21  VCGLGILTLGVLIHLQILGVSKQIE 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,640
Number of Sequences: 438
Number of extensions: 1246
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)