Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C09
(306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 62 3e-10
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 62 3e-10
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 62 3e-10
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 62 3e-10
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 62 3e-10
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 62 3e-10
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 62 3e-10
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 62 3e-10
X91349-1|CAA62690.1| 858|Homo sapiens de-ubiquitinase protein. 31 0.50
U47927-1|AAC50465.1| 858|Homo sapiens isopeptidase T protein. 31 0.50
U47924-8|AAB51314.1| 835|Homo sapiens isopeptidase T protein. 31 0.50
U47924-7|AAB51315.1| 858|Homo sapiens isopeptidase T protein. 31 0.50
U35116-1|AAA78934.1| 835|Homo sapiens ubiquitin isopeptidase T ... 31 0.50
BC005139-1|AAH05139.1| 858|Homo sapiens USP5 protein protein. 31 0.50
BC004889-1|AAH04889.1| 835|Homo sapiens ubiquitin specific pept... 31 0.50
D50923-1|BAA09482.2| 1527|Homo sapiens KIAA0133 protein. 30 1.2
BC114963-1|AAI14964.1| 1524|Homo sapiens KIAA0133 protein. 30 1.2
BC114559-1|AAI14560.1| 1524|Homo sapiens KIAA0133 protein protein. 30 1.2
AL354983-4|CAH70043.1| 1524|Homo sapiens KIAA0133 protein. 30 1.2
AL121990-9|CAI22017.1| 1524|Homo sapiens KIAA0133 protein. 30 1.2
AB046575-1|BAC06442.1| 26|Homo sapiens V-ATPase subunit c prot... 29 3.5
M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein. 28 4.6
L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein. 28 4.6
EF534714-1|ABQ15210.1| 431|Homo sapiens FOXP3 protein. 28 4.6
D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding prote... 28 4.6
DQ010327-1|AAY27088.1| 396|Homo sapiens forkhead box P3 protein. 28 4.6
BC113403-1|AAI13404.1| 431|Homo sapiens forkhead box P3 protein. 28 4.6
BC113401-1|AAI13402.1| 431|Homo sapiens forkhead box P3 protein. 28 4.6
AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1, transl... 28 4.6
AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1, transl... 28 4.6
AJ005891-1|CAA06748.1| 441|Homo sapiens JM2 protein. 28 4.6
AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein. 28 4.6
AF277993-1|AAG53607.1| 431|Homo sapiens scurfin protein. 28 4.6
AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein. 28 4.6
AB209873-1|BAD93110.1| 2067|Homo sapiens notch1 preproprotein va... 28 4.6
AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2 v... 28 4.6
BC024159-1|AAH24159.2| 858|Homo sapiens leucine rich repeat con... 27 8.1
AL391497-3|CAH72226.1| 858|Homo sapiens leucine rich repeat con... 27 8.1
AL391497-2|CAH72225.1| 313|Homo sapiens leucine rich repeat con... 27 8.1
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
TAKSGTGIAAM+VMRPEQIMKSIIPVVMAGI
Sbjct: 34 TAKSGTGIAAMSVMRPEQIMKSIIPVVMAGI 64
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFSSLGAAY 208
P Y FF VMGA++A++FS+LGAAY
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAY 32
>X91349-1|CAA62690.1| 858|Homo sapiens de-ubiquitinase protein.
Length = 858
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 716 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
>U47927-1|AAC50465.1| 858|Homo sapiens isopeptidase T protein.
Length = 858
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 716 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
>U47924-8|AAB51314.1| 835|Homo sapiens isopeptidase T protein.
Length = 835
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 693 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 739
>U47924-7|AAB51315.1| 858|Homo sapiens isopeptidase T protein.
Length = 858
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 716 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
>U35116-1|AAA78934.1| 835|Homo sapiens ubiquitin isopeptidase T
protein.
Length = 835
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 693 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 739
>BC005139-1|AAH05139.1| 858|Homo sapiens USP5 protein protein.
Length = 858
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 716 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
>BC004889-1|AAH04889.1| 835|Homo sapiens ubiquitin specific
peptidase 5 (isopeptidase T) protein.
Length = 835
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 250 TAMAAIPVPDLAVHICSTKGAEDD----GRRRPHNSKERSIDWIFGH 122
T+ AA P P+ V + G D R +NS ER++DWIF H
Sbjct: 693 TSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 739
>D50923-1|BAA09482.2| 1527|Homo sapiens KIAA0133 protein.
Length = 1527
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 CVQIVIRVFGTCKYSHIQEKWPK-IQSMDLSLEL 161
C Q++ R+FG K SH+QE+ K + + D + EL
Sbjct: 327 CFQVLPRLFGCLKISHLQEEQSKALSTSDWTTEL 360
>BC114963-1|AAI14964.1| 1524|Homo sapiens KIAA0133 protein.
Length = 1524
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 CVQIVIRVFGTCKYSHIQEKWPK-IQSMDLSLEL 161
C Q++ R+FG K SH+QE+ K + + D + EL
Sbjct: 324 CFQVLPRLFGCLKISHLQEEQSKALSTSDWTTEL 357
>BC114559-1|AAI14560.1| 1524|Homo sapiens KIAA0133 protein protein.
Length = 1524
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 CVQIVIRVFGTCKYSHIQEKWPK-IQSMDLSLEL 161
C Q++ R+FG K SH+QE+ K + + D + EL
Sbjct: 324 CFQVLPRLFGCLKISHLQEEQSKALSTSDWTTEL 357
>AL354983-4|CAH70043.1| 1524|Homo sapiens KIAA0133 protein.
Length = 1524
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 CVQIVIRVFGTCKYSHIQEKWPK-IQSMDLSLEL 161
C Q++ R+FG K SH+QE+ K + + D + EL
Sbjct: 324 CFQVLPRLFGCLKISHLQEEQSKALSTSDWTTEL 357
>AL121990-9|CAI22017.1| 1524|Homo sapiens KIAA0133 protein.
Length = 1524
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 CVQIVIRVFGTCKYSHIQEKWPK-IQSMDLSLEL 161
C Q++ R+FG K SH+QE+ K + + D + EL
Sbjct: 324 CFQVLPRLFGCLKISHLQEEQSKALSTSDWTTEL 357
>AB046575-1|BAC06442.1| 26|Homo sapiens V-ATPase subunit c
protein.
Length = 26
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 134 PIYGPFFGVMGAASAIIFS 190
P Y FF VMGA++A++FS
Sbjct: 8 PEYASFFAVMGASAAMVFS 26
>M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.
Length = 2444
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 230 RYCRHGGDAA*ADHEIHHSRCHGGY 304
R C+HGG A + HH RC GY
Sbjct: 1115 RLCQHGGLCVDAGNT-HHCRCQAGY 1138
>L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein.
Length = 3224
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 184 DDGRRRPHNSKERSIDWIFGHFS*MWEYLQVPKTLMTICTHSLHETTLAQTNMAQASC 11
D G R HN + + W+ ++ + + K L + H HET+ +TN ++ C
Sbjct: 423 DVGAIRAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESIC 480
>EF534714-1|ABQ15210.1| 431|Homo sapiens FOXP3 protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 CCICAQPSQAPVLPPW 246
CCI A SQ PV+P W
Sbjct: 280 CCIVAAGSQGPVVPAW 295
>D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding protein
2) protein.
Length = 3224
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 184 DDGRRRPHNSKERSIDWIFGHFS*MWEYLQVPKTLMTICTHSLHETTLAQTNMAQASC 11
D G R HN + + W+ ++ + + K L + H HET+ +TN ++ C
Sbjct: 423 DVGAIRAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESIC 480
>DQ010327-1|AAY27088.1| 396|Homo sapiens forkhead box P3 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 CCICAQPSQAPVLPPW 246
CCI A SQ PV+P W
Sbjct: 245 CCIVAAGSQGPVVPAW 260
>BC113403-1|AAI13404.1| 431|Homo sapiens forkhead box P3 protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 CCICAQPSQAPVLPPW 246
CCI A SQ PV+P W
Sbjct: 280 CCIVAAGSQGPVVPAW 295
>BC113401-1|AAI13402.1| 431|Homo sapiens forkhead box P3 protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 CCICAQPSQAPVLPPW 246
CCI A SQ PV+P W
Sbjct: 280 CCIVAAGSQGPVVPAW 295
>AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1,
translocation-associated (Drosophila) protein.
Length = 2555
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 230 RYCRHGGDAA*ADHEIHHSRCHGGY 304
R C+HGG A + HH RC GY
Sbjct: 1114 RLCQHGGLCVDAGNT-HHCRCQAGY 1137
>AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1,
translocation-associated (Drosophila) protein.
Length = 2555
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 230 RYCRHGGDAA*ADHEIHHSRCHGGY 304
R C+HGG A + HH RC GY
Sbjct: 1114 RLCQHGGLCVDAGNT-HHCRCQAGY 1137
>AJ005891-1|CAA06748.1| 441|Homo sapiens JM2 protein.
Length = 441
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 CCICAQPSQAPVLPPW 246
CCI A SQ PV+P W
Sbjct: 230 CCIVAAGSQGPVVPAW 245
>AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.
Length = 2556
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 230 RYCRHGGDAA*ADHEIHHSRCHGGY 304
R C+HGG A + HH RC GY
Sbjct: 1115 RLCQHGGLCVDAGNT-HHCRCQAGY 1138
>AF277993-1|AAG53607.1| 431|Homo sapiens scurfin protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 CCICAQPSQAPVLPPW 246
CCI A SQ PV+P W
Sbjct: 280 CCIVAAGSQGPVVPAW 295
>AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein.
Length = 3224
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 184 DDGRRRPHNSKERSIDWIFGHFS*MWEYLQVPKTLMTICTHSLHETTLAQTNMAQASC 11
D G R HN + + W+ ++ + + K L + H HET+ +TN ++ C
Sbjct: 423 DVGAIRAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESIC 480
>AB209873-1|BAD93110.1| 2067|Homo sapiens notch1 preproprotein
variant protein.
Length = 2067
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 230 RYCRHGGDAA*ADHEIHHSRCHGGY 304
R C+HGG A + HH RC GY
Sbjct: 626 RLCQHGGLCVDAGNT-HHCRCQAGY 649
>AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2
variant protein.
Length = 3138
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 184 DDGRRRPHNSKERSIDWIFGHFS*MWEYLQVPKTLMTICTHSLHETTLAQTNMAQASC 11
D G R HN + + W+ ++ + + K L + H HET+ +TN ++ C
Sbjct: 337 DVGAIRAHNGSLQHLTWLGLQWNSLPALPGIRKWLKQLFHHLPHETSRLETNAPESIC 394
>BC024159-1|AAH24159.2| 858|Homo sapiens leucine rich repeat
containing 8 family, member D protein.
Length = 858
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 124 GRKSNLWTFLWSYGGGVCHHLQLPW 198
GRK+NL + + +C+HL LPW
Sbjct: 136 GRKTNLDFQQYVFINQMCYHLALPW 160
>AL391497-3|CAH72226.1| 858|Homo sapiens leucine rich repeat
containing 8 family, member D protein.
Length = 858
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 124 GRKSNLWTFLWSYGGGVCHHLQLPW 198
GRK+NL + + +C+HL LPW
Sbjct: 136 GRKTNLDFQQYVFINQMCYHLALPW 160
>AL391497-2|CAH72225.1| 313|Homo sapiens leucine rich repeat
containing 8 family, member D protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 124 GRKSNLWTFLWSYGGGVCHHLQLPW 198
GRK+NL + + +C+HL LPW
Sbjct: 136 GRKTNLDFQQYVFINQMCYHLALPW 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,009,671
Number of Sequences: 237096
Number of extensions: 1448133
Number of successful extensions: 7304
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 7186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7304
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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