Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C09
         (306 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    59   1e-11
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.21 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.0  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   2.6  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    20   7.9  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 59.3 bits (137), Expect = 1e-11
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +3

Query: 213 TAKSGTGIAAMAVMRPEQIMKSIIPVVMAGI 305
           TAKSGTGIAAM+VMRPE IMKSIIPVVMAGI
Sbjct: 33  TAKSGTGIAAMSVMRPELIMKSIIPVVMAGI 63



 Score = 52.8 bits (121), Expect = 9e-10
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +2

Query: 128 ENPIYGPFFGVMGAASAIIFSSLGAAY 208
           ++PIY PFFGVMGAASAIIFS+LGAAY
Sbjct: 5   DHPIYAPFFGVMGAASAIIFSALGAAY 31


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -2

Query: 257 PHHRHGGNT-GA*LGCAHMQH 198
           PHH+HG +T G  +G  H  H
Sbjct: 334 PHHQHGNHTMGPTMGPPHHHH 354


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  VSWSECVQIVIRVFGTCKYSHIQ 116
           +SW E +QI + V    +Y H Q
Sbjct: 694 LSWLERIQIALDVLEGIRYLHSQ 716


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  VSWSECVQIVIRVFGTCKYSHIQ 116
           +SW E +QI + V    +Y H Q
Sbjct: 732 LSWLERIQIALDVLEGIRYLHSQ 754


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 224 RHR-YCRHGGDAA*ADH-EIHHSRCHGG 301
           RHR  C   G    A+H E+H + CH G
Sbjct: 113 RHRPVCASNGKIY-ANHCELHRAACHSG 139


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +1

Query: 139 LWTFLWSYGGGVCHH-LQLP 195
           LW    ++ GG CH  +Q+P
Sbjct: 2   LWRMTGTWVGGFCHSIIQIP 21


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 222 SGTGIAAMAVMRPEQIMKSIIPVVM 296
           +G  +A  +  RP+ ++K   P+VM
Sbjct: 21  AGQVLAGSSSPRPKPLLKKEYPLVM 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,493
Number of Sequences: 438
Number of extensions: 2819
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)