Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C08
(402 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 173 4e-44
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 171 1e-43
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 171 1e-43
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 171 2e-43
03_01_0034 + 318432-318825,318902-319851 171 2e-43
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 170 3e-43
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 169 7e-43
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 164 2e-41
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 71 3e-13
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 70 8e-13
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 69 1e-12
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 68 2e-12
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 1.4
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 1.4
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 1.8
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 2.4
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 3.2
12_02_0352 - 17862577-17863528,17864076-17864827 27 4.2
07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837 27 4.2
11_06_0338 + 22479804-22480651,22480764-22482954 27 7.3
09_01_0092 - 1311892-1312055,1312490-1312574,1312628-1312936,131... 27 7.3
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 27 7.3
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 27 7.3
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 27 7.3
01_01_0757 - 5840736-5842574 27 7.3
11_06_0516 + 24502645-24504507 26 9.7
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 26 9.7
06_02_0068 + 11107493-11107653,11109116-11109218,11109311-111094... 26 9.7
05_01_0602 + 5394341-5394520,5395083-5395586 26 9.7
04_04_1564 + 34449233-34449412,34449967-34450470 26 9.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 173 bits (421), Expect = 4e-44
Identities = 75/83 (90%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPPRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLV+EYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVAEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 171 bits (417), Expect = 1e-43
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 364 EWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 423
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 424 MDEMEFTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 171 bits (417), Expect = 1e-43
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVSEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 171 bits (416), Expect = 2e-43
Identities = 74/83 (89%), Positives = 82/83 (98%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 523 EWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 582
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 583 MDEMEFTEAESNMNDLVSEYQQY 605
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 171 bits (415), Expect = 2e-43
Identities = 75/83 (90%), Positives = 81/83 (97%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVSEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 170 bits (414), Expect = 3e-43
Identities = 74/83 (89%), Positives = 82/83 (98%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLV+EYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVAEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 169 bits (411), Expect = 7e-43
Identities = 74/83 (89%), Positives = 82/83 (98%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLV+EYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 164 bits (399), Expect = 2e-41
Identities = 71/83 (85%), Positives = 80/83 (96%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVK++VCDIPP GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EG
Sbjct: 359 EWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEG 418
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLV+EYQQY
Sbjct: 419 MDEMEFTEAESNMNDLVAEYQQY 441
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 70.9 bits (166), Expect = 3e-13
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + + A I N+TA+ E+F RI +F M+ ++AF
Sbjct: 426 DWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAF 485
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 486 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 69.7 bits (163), Expect = 8e-13
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP ++ A I N+TA+ E+F RI +F M+ ++AF
Sbjct: 345 DWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP ++ A I NST++ E+F RI +F M+ ++AF
Sbjct: 345 DWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 68.1 bits (159), Expect = 2e-12
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP ++ A I NST++ E+F RI +F M+ ++AF
Sbjct: 345 DWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 196 LVH-ALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHG 35
LVH ALA + A+ + +RDAL L + + GRR +AG A G
Sbjct: 96 LVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAG 150
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 1.4
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -3
Query: 232 IVHVALRLRELHLVHALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAG 53
+VH A LHLVHA++ V L E S EL D + L V + R AG
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTSLVRTKARIVEGDAG 124
Query: 52 R 50
+
Sbjct: 125 K 125
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 240 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 118
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -1
Query: 231 SFMLLSASVNSISSMPSPVYQCKKALRLNIAVN 133
S +L S N + S+P + +C+ + L+++ N
Sbjct: 261 SLKILDVSGNKLRSLPDSISKCRSLVELDVSYN 293
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 219 LSASVNSISSMPSPVYQCKKALRLNIAVN 133
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 240 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 118
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 163 ESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRD 14
E ++S GE + +L+ GG D+G R ++AH + V D
Sbjct: 4 EMISSAVVGETLNRVVSRLVSGGSHNDDGMRGNSMERLEMAHSRMEAVLD 53
>07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837
Length = 730
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 11 WIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRR 154
WI N VK + D+P G K+ FI +++ Q+ A ++R
Sbjct: 568 WITNKVKESWSDVPLHGNKI-EWFINQGDMVKKAIASFPFQYQANYKR 614
>11_06_0338 + 22479804-22480651,22480764-22482954
Length = 1012
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 136 ELFRDALEQLLDGGRVTDEGRRH 68
E +++ +LL GGR+TD RH
Sbjct: 18 EPLHESISKLLKGGRITDARERH 40
>09_01_0092 -
1311892-1312055,1312490-1312574,1312628-1312936,
1314155-1314229,1314363-1314438,1315594-1315679,
1315958-1316203,1316399-1316614
Length = 418
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 219 LSASVNSISSMPSPVYQCKKALRLNIAV 136
L+ S N+IS +P + C K RLN+ V
Sbjct: 207 LNESNNTISVLPDELAGCSKLFRLNLEV 234
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 22 QREDRRVRHPAPRTEDG 72
QRE RVR P PR+ DG
Sbjct: 190 QRERERVRPPLPRSSDG 206
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = -3
Query: 193 VHALAGVPVQESLASEHSGELFRDALEQL--------LDGGRVTDEGRRHLQSAGRDVAH 38
V+A+ G+ V E L +E+ L + L+ G+ G+R ++ GR++
Sbjct: 235 VNAVEGLKVYEGLVNENEKNKILSLLNETKASFRRGGLEAGQTVIIGKRPMKGHGREIIQ 294
Query: 37 GGLHVVRDP 11
G+ +V P
Sbjct: 295 LGIPIVEGP 303
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 238 DEIVHVALRLRELHLVHALAGVP-VQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQ 62
DE + L+L E HL A + V E+LA++ S + E+LL + +EG HL+
Sbjct: 8 DEAASIELQL-EHHLQEQRASLTAVDEALAADPSNADLLEVHEELLAAIKDAEEGLLHLK 66
>01_01_0757 - 5840736-5842574
Length = 612
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 17 PNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 181
PN + +V R + A GNST L I +Q+T ++ LH Y G
Sbjct: 139 PNGIVWSVSKDVTRYASLLAA--GNSTLAVYLGNLIDDQYTGVYHANITLHLYFG 191
>11_06_0516 + 24502645-24504507
Length = 620
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 140 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 244
A+ +++ +HW+ GEG E +S ++L+++
Sbjct: 205 AVIKKRLLIHWWLGEGF-VRSAAEGKSRFDELIAK 238
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 136 ELFRDALEQLLDGGRVTDEGRRHLQ-SAGRDVAH 38
+L + A EQ+ DGG+ TDE + L+ R ++H
Sbjct: 383 QLAKQAKEQVCDGGQQTDESQLTLECDKRRAISH 416
>06_02_0068 + 11107493-11107653,11109116-11109218,11109311-11109423,
11109502-11109624,11110165-11110266,11110367-11110532,
11111215-11111331,11111438-11111478,11111735-11111836,
11111924-11112140,11112271-11112498,11112580-11112707,
11112804-11112921,11113020-11113235,11113314-11113463,
11113553-11113629,11113973-11114190,11114443-11114656,
11114744-11114823,11114898-11115015,11115092-11115262,
11116124-11116292,11116404-11116447,11116620-11116662,
11116743-11116888,11118337-11118431,11118579-11119477,
11120540-11120638,11120907-11121002,11123447-11123568,
11123675-11123767,11123922-11124114
Length = 1653
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 198 ISSMPSPVYQCKKALRLNIAVNCSEMRLN 112
+++M P Q ++A+ + I + CS MRL+
Sbjct: 1444 LANMSHPSAQIREAIGVTICIACSNMRLS 1472
>05_01_0602 + 5394341-5394520,5395083-5395586
Length = 227
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 238 DEIVHVALRLRELH-LVHALAGVP 170
DE+ +VA R RE+H H L G+P
Sbjct: 112 DELAYVATRAREVHDFWHVLFGLP 135
>04_04_1564 + 34449233-34449412,34449967-34450470
Length = 227
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 238 DEIVHVALRLRELH-LVHALAGVP 170
DE+ +VA R RE+H H L G+P
Sbjct: 112 DELAYVATRAREVHDFWHVLFGLP 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,021,012
Number of Sequences: 37544
Number of extensions: 124404
Number of successful extensions: 543
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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